Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02717 ATGCTTGTCGGCGAATGCTTTGCCGAAGTTTTAGCTGTCACTGGTTACTCCACGGCAAGGTTGCCGAACTTGAAGGTGTTAGTTTCTTCTGAAGAtgaattttgtgaattttggTTCGGGCGAGAGAATATGCCACTTCTGGTTGTCTTTCTCCTTGctcttcttaatttgtttttctcttgctCAGTGAAGTCAATTTCTTTGAATGTGTCATTTGCTTCATCAAAACATGGTGAGATGTGGTTATTCAAGTCTTCTTTGGGTCAATCTTCTGCTCCTGCACCTTCTCCTCTagCTCCAGTTGTGCATCCAAGGCCTAgacatcatcatcatcgtcatcATCGTAGTGTGAGACCTCATCTTGTCGCTCCACCCCCTTCAAAGGATCAAGATTGCGACCAAACCTGTACAGATCCACTCACAACAACTCCCTTTGGTTCACCTTGTGGCTGTGTATTTCCCATGAAAGTCACACTTATACTAGATGTGGCTCCTTATGCTGTTTTCCCAGTAATGAATGAGTTAGAAATTGAGATTGCAACAGGCACATATTTGGAGCAGAGTCAGGTGAAGATAATGGGTGCCACTGCTGACCATCAAAACCTGGGGAAAACTGTAGTTGATATTAACTTGGTTCCATTGGGAGAGAGATTTGATAATACCACTGCAGTTCTGATTTACGACAGGTTTTGGCACAAGAAAGTTCCTCTGAACAGTAGCCTTTTCGGTGATTATGCCGTAGCATACATTAGTTATCCAGGAATTCCATCATCACCACCATATGGAAGTTACACGGGAAATGCGCCCAGTGGAAGTGCTGGTAATCTTCCCATCACAGCCAACTTTGTTAACAAGTCCCAGAGAATGAATCTTAGAAccataataattattactttatcTGCATCTCTACTCTTGTTCGTTTTGGTTGGAGCATTTTCTATCATCTTGAAATGGAGGAAGATTAGAAGGCCATCAATTGCTGTTGGTCCTGCTTTCACTTCATCTACAAACAAGAGATCTGGTATTGGGTCTGTTTTGTCAGGCAGTATTACAAGCTCTACGTCTGTGTCCCTTATGTCCACCAGGGCTACTTCTATTCGCTCTGTTAGAACATTTGCACTTTCTGAGCTTGAGAAAGCTACAGTTAAGTTCAGCTCTAAGAGAGTTTTGGGAGAAGGAGGATTTGGACGTGTTTATCATGGGACATTGGAAGATGGAACTGAAGTTGCAGTTAAGATGCTAACAAGGGACAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTTGAGATGCTTAGTCGTTTGCATCACCGTAATCTTGTTAAACTCATTGGTATATGCATTGAAGGGCGTAGACGGTGCTTGGTGTATGAACTTGTTCACAATGGCAGTGTTGAGTCCCATTTACATGGTGCTGACAAGAAAAAGGGCCCTCTAGATTGGGAAGCACGGATGAAAATTGCGCTTGGAGCTGCTAGAGGATTGGCTTATCTTCATGAGGATTCTAATCCTCGTGTAATTCACCGAGACTTTAAGGCTAGTAATGTTTTATTAGAAGATGACTTTACTCCCAAGGTTTCTGATTTTGGGTTGGCAAGAGAAGCAACTGAGGGAAGTCATCATATTTCTACGCGGGTCATGGGGACTTTTGGGTATGTTGCCCCAGAATATGCAATGACCGGCCATTTGCTTGTTAAAAGTGATGTTTATAGTTATGGTGTTGTGTTGCTTGAACTTCTCACTGGTAGAAAACCGGTAGACATGTCTCAACCTCCTGGACAGGAGAATCTGGTAACCTGGGCACGACCACTCTTGACCACTAGAGAAGGTTTAGAGCAGCTAGTTGATCCATCCTTAGCCGGAAGTTATGACTTCGATGATATGGCAAAGGTGGCTGCCATTGCTTCAATGTGCGTCCACCCAGAGGTCACTCACAGACCTTTTATGGGTGAAGTCGTGCAGGCTCTAAAGCTGATATACAACGACACAGACGAGACTTGTGGGGATTGCATCAGTCAGAAAGAATCTTCTGCCCATGAGTCTGATTTTAGAGGGGATTTGGCCCCTTCCGATAGCAGTTGGTGGAATGCTGGAGGATTAACCCCACGATTAACTTACGGTCAAGCATCATCATTCATCACAATGGAATATAGTTCTGGTCCActtgaagaaatggaaaacAGAGCGTTTTCAACTTCAAGCTTGATTAGAGACGGGATATCTTTACCAATTAGGCATGGGAATAGATCAGGTCCCTTGAGAACAGTCCGGAGTAAGCTGTCCTTATATAGATTTTCTGGAAGTCAGAGTGAACATGGTGGACTTCCTTCCAAGCGTGTTTCTAATGATGGTTACTGGGTTTA 2363 0.4198 MLVGECFAEVLAVTGYSTARLPNLKVLVSSEDEFCEFWFGRENMPLLVVFLLALLNLFFSCSVKSISLNVSFASSKHGEMWLFKSSLGQSSAPAPSPLAPVVHPRPRHHHHRHHRSVRPHLVAPPPSKDQDCDQTCTDPLTTTPFGSPCGCVFPMKVTLILDVAPYAVFPVMNELEIEIATGTYLEQSQVKIMGATADHQNLGKTVVDINLVPLGERFDNTTAVLIYDRFWHKKVPLNSSLFGDYAVAYISYPGIPSSPPYGSYTGNAPSGSAGNLPITANFVNKSQRMNLRTIIIITLSASLLLFVLVGAFSIILKWRKIRRPSIAVGPAFTSSTNKRSGIGSVLSGSITSSTSVSLMSTRATSIRSVRTFALSELEKATVKFSSKRVLGEGGFGRVYHGTLEDGTEVAVKMLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHGADKKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVTWARPLLTTREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDTDETCGDCISQKESSAHESDFRGDLAPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRAFSTSSLIRDGISLPIRHGNRSGPLRTVRSKLSLYRFSGSQSEHGGLPSKRVSNDGYWV 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02717 787 CDD STKc_IRAK 390 659 - -
Bva04g02717 787 Gene3D Phosphorylase Kinase; domain 1 354 459 - -
Bva04g02717 787 MobiDBLite consensus disorder prediction 103 119 - -
Bva04g02717 787 ProSiteProfiles Protein kinase domain profile. 384 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02717 787 SUPERFAMILY Protein kinase-like (PK-like) 368 657 IPR011009 -
Bva04g02717 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Bva04g02717 787 Gene3D Transferase(Phosphotransferase) domain 1 460 681 - -
Bva04g02717 787 Pfam Protein tyrosine and serine/threonine kinase 386 655 IPR001245 GO:0004672|GO:0006468
Bva04g02717 787 MobiDBLite consensus disorder prediction 767 787 - -
Bva04g02717 787 ProSitePatterns Protein kinases ATP-binding region signature. 390 412 IPR017441 GO:0005524
Bva04g02717 787 PANTHER OS01G0750732 PROTEIN 48 783 - -
Bva04g02717 787 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 48 783 - -
Bva04g02717 787 MobiDBLite consensus disorder prediction 94 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02717 Bva-Chr4 23723270 23728595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02717 129 773 Receptor kinase-like Gene Family AT5G56890 54.370 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Bva04g02717 PK_Tyr_Ser-Thr 7.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02717 - - gmx:100815554 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02717 04 23723270 23728595 Bva13g03072 13 21718579 21724303 BWGD
Bva04g02717 04 23723270 23728595 Bva04g02717 04 23723270 23728595 ECH