Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02685 ATGTCTACTTACTCCAAACCAGAGAATGCCCTGAAAAGGGCTGAAGAATTGATCAACGTGGGGCAGAAGCAGGATGCTTTGCAAACTCTTCATGACCTTATCACTTCAAGAAGATACAGAGCGTGGCAGAAGACTCTTGAAAGGATTATGTTCAAGTACGTAGAGCTATGTGTGGAGATGCGTAAAGGACGATTTGCAAAGGATGGGCTTATTCAGTATCGTATCATATGCCAGCAAGTAAATGTTAGTTCGCTGGAGGAGGTGATCAAGCATTTCATGCATCTGTCTACTGAGAAAGCTGAAGAAGCTCGTAGCCAGGCACAGGCATTGGAAGAGGCTCTTGATGTTGATGATTTAGAGGCTGATAAAAGGCCTGAGGACTTGATGCTAAGCTATGTGAGTggggagaaaggaaaagaaagatctGATCGGGAACTGGTGACTCCATGGTTTAAATTTCTATGGGAAACGTACAGGACCGTGCTTGAAATATTACGGAACAACTCAAAATTGGAAGCCTTATATGCTATGACAGCACATCGGGCTTTCCAGTTTTGCAAGCAGTACAAGCGAACAACAGAGTTTCGCAGACTATGTGAAATCATAAGAAACCATCTAGCAAATCTCAATAAATATCGGGACCAAAGGGACCGACCTGATCTTTCAGCTCCTGAAAGCTTGCAACTCTATCTTGACACAAGACTCGAGCAACTGAAGATTGCTACTGAACTTGAGCTTTGGCAGGAAGCATTTCGGTCAATTGAAGATATACATGGACTGATGTGCTTGGTCAAGAAGACACCAAAACCATCACTGATGGTTGTTTACTATGCTAAGCTGACAGAAGTATTTTGGATATCGTCAAGCCATCTATATCACGCCTATGCATGGTTTAGGCTATTTTTGCTACAAAAGAGCTTTAATAAGAATCTGAGCCAGAAGGATTTACAGTTGATTGCTTCATCTGTTGTTCTGGCTGCACTTTCTGTGCCTCCCTACAATCACATCCGTGGTGCATCTCATTTGGAACAGGAGCATGAAAAAGAGAGGAATCTGAGAATGGCTAATCTCATTGGTTTTAATCTTGAGACTAAATCTGAGAGCAGAGAAGTGCTTTCAAGGTCATCCCTTCTCTCTGAATTGGTTTCCAAGGGTGTGATGTCTTGTGCAACTCAGGAAGTGAAGGACATTTACCATCTCTTGGAACATGAATTTCTCCCCTTAGATCTAGCTATAAAAGTGCAGCCCTTGTTAAGTAAAATCTCAAAGTTAGGGGGTAAACTTTCCACTGCTTCATCTGTCCCAGAGGTCCAATTGTCTCAGTATATCCCGGCCATGGAAAAACTTGCAACCTTGCGGTTGCTGCAGCAGGTATCCAATGTATACCAGACGATGAAGATAGAGACCTTATTTGGAATGATCCCCTTctttaaagatttttctttggtaGAAAAGATATCCGTGGATGCTGTGAAgcataattttgtttctatgaAAGTTGACCACATGAGGAATGTTGTTATTTTCTCCAAGACGAATCTTGAGTCTGATGGCTTAAGGGAACACTTGGCCATTTTTGCTGAAAATTTGAACAAGGCAAGACAAATGATTCATCCTCCAGCtaagaaaacatcaaaaattGGAGCCTTGCTGCCCACCTTGACAGAGGTTGTGGAGAAGGAACACAAGAGGCTTCTTGCTCGAAAATCAATTATTGAGAAGCGGAAGGAAGAACAAGAACGGCAGCTTCTTGAAATGGAACGTGAAGAGGAGTCAAAGAGGTTAAGACTTCAGAAAATAACTGAAGAAGCAGAACAAAGAAGACTTGCCACTGAGTATGAGCAAAGGAAGAACCAGAGGATACTCAGGGAAatagaggaaaaggaaatggaagaaaaacaagCCTTGCTTCAAGAGGCTGAAAAGCGTAATAAACATAAGAAGGGAAAGAAGCCAATCATAGAGGGAGAAAAACTCACCAAGCAAAGCTTGATGGAGTTGACTTTGACTGAGCAACTCCGAGAAAGACaggaaatggaaaagaaactaCAAAAATTAGCAAAAACCATGGATTATTTGGAAAGAGCAAAAAGAGAGGAGGCTGCTCCCCTGATTGAAGCTGCATATCAAAATCGCCTTGTGGAAGAGAGGATTCTGCATGAGCATGAACAACAGCAAGAGATTAAGCTCAGCCAAGAGCGCCATGAGGGAGATCTTAGGGAGAAGATTAGGCTGGCTCGAATGATGGAAAATAAAGAGGTATATCAACAGATTGTTGTCAGCAAGCGTCAAGCTGAATTCAACAGATTGAGGAGGGAGAAAGAGGAGCGAATCTCTAGGATTTTACAGTCCAGGAGAcaggagagagaaaaactgAGGAAGTTGAAGTATTATCTTAACTTAGAAGAAGAGAGACAGCAGAGGCTTCGGGAGGAAGAGGAGGCTCGCAGGCATGAAGAGGCCGAGAGGAGGAAGATGGAGGAAGCTGAACGCAAAGCAAAATTGGATGTGATAGCTGAAAAGCAGAGGTTAAGAGAGCAGGAACTGGAAGAAAAGGAGAGGAAAAGGAGAGAGGAGATCTTTACTAGACCTACTGAAGCTGGACCAGCTTCTGCTGCTGCTCCCGTCCGTCCATCAGAGGCAGGATCTGCAGCTGCTCCTGCTGCGGCTGCCGCAGCTGCAGCACCATCCCAAGGGAAGTACGTTCCCAGGTTCCGGCGTGAGAACCCTGATGCCTCAGCCCCTGCTGCTACCCCGCCAGAAACGGATCGTTGGACCAGCTCCGGCCCTAGGACGGGTGGTGACAGCTGGCGCAATGATGATCGTAGAAGTTCATTTGGTGGTGGCGGCGGCGCGGGAAGGTCAACCTGGTCCAGGAATCCACGGTG 2888 0.4304 MSTYSKPENALKRAEELINVGQKQDALQTLHDLITSRRYRAWQKTLERIMFKYVELCVEMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEEARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKERSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRLEQLKIATELELWQEAFRSIEDIHGLMCLVKKTPKPSLMVVYYAKLTEVFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPYNHIRGASHLEQEHEKERNLRMANLIGFNLETKSESREVLSRSSLLSELVSKGVMSCATQEVKDIYHLLEHEFLPLDLAIKVQPLLSKISKLGGKLSTASSVPEVQLSQYIPAMEKLATLRLLQQVSNVYQTMKIETLFGMIPFFKDFSLVEKISVDAVKHNFVSMKVDHMRNVVIFSKTNLESDGLREHLAIFAENLNKARQMIHPPAKKTSKIGALLPTLTEVVEKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRILREIEEKEMEEKQALLQEAEKRNKHKKGKKPIIEGEKLTKQSLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQNRLVEERILHEHEQQQEIKLSQERHEGDLREKIRLARMMENKEVYQQIVVSKRQAEFNRLRREKEERISRILQSRRQEREKLRKLKYYLNLEEERQQRLREEEEARRHEEAERRKMEEAERKAKLDVIAEKQRLREQELEEKERKRREEIFTRPTEAGPASAAAPVRPSEAGSAAAPAAAAAAAAPSQGKYVPRFRRENPDASAPAATPPETDRWTSSGPRTGGDSWRNDDRRSSFGGGGGAGRSTWSRNPR 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02685 962 Coils Coil 562 603 - -
Bva04g02685 962 Coils Coil 669 699 - -
Bva04g02685 962 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 942 IPR027512 GO:0005852
Bva04g02685 962 Pfam PCI domain 373 511 IPR000717 -
Bva04g02685 962 Gene3D UVR domain 217 268 - -
Bva04g02685 962 ProSiteProfiles PCI domain profile. 316 514 IPR000717 -
Bva04g02685 962 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A 1 911 - -
Bva04g02685 962 Coils Coil 798 832 - -
Bva04g02685 962 Gene3D - 352 494 - -
Bva04g02685 962 Gene3D - 269 344 - -
Bva04g02685 962 MobiDBLite consensus disorder prediction 807 863 - -
Bva04g02685 962 Coils Coil 771 791 - -
Bva04g02685 962 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 911 IPR027512 GO:0005852
Bva04g02685 962 MobiDBLite consensus disorder prediction 920 934 - -
Bva04g02685 962 Coils Coil 838 859 - -
Bva04g02685 962 Coils Coil 93 120 - -
Bva04g02685 962 Coils Coil 618 650 - -
Bva04g02685 962 MobiDBLite consensus disorder prediction 807 962 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02685 Bva-Chr4 23550122 23556073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02685 1 962 Eukaryotic Initiation Factors Gene Family AT4G11420 71.869 0.0 1310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02685 K03254 - gmx:100782598 1390.17