Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02681 ATGGGAGAGGCAGCAATTTGTGTCGAAGTATTAGCAGATGGAAGGAGAGAAGATAACGAGGTATCAAGAACAGAACTGAAACGAGACTGCCAATGTCTTGCTGATGCTGAACTTGACCAGTCTCCGAGTAAGAAACAGGCAAAAGAAGTTTCAAATGATGACGTGCGCTCTGAGGTTTCCAACCCCCACACTTCTCCGAAAGAGAATGCCTTAACTTTTCAAGATATCAGTAGCCAACCTGCTGAATTGGAAAATACTAACCAGGCAGAGTGTGGTGAAGTTACGTCAACTTGCTTGGAGAATTCTAGTTCTGATGAGACCTTGAGTGATGGAGGGGCCAATCAGACTAACACTtctcaaaatgaaaaggatACGAGTACCTCCTGTGTTGTGCTTGAAATCCCCAAGCATGCAAGCACTACTGGGATCAGAAAGATCACATTCAAGTTCAGCAAAAAGAAGGAGgactataattataattcacCTGCTACAACTTATCAGCATCCTTACGGCTTTCATGACGATGACGAGGAACCCTATGGAAGGGCTTATAGCAATACGGGGACGTTAGAAAGCTCATATGGGATGGACTATGTTCGAAATGGAGATTTTAACTTGTATGCTCGAAATATGGAATTCAAAATGTCAAAGAAAGTAGTCCCAAATTGCTATCCTACGAATGTCAAAAGGCTGTTGTCAACTGGTATACTTGACGGTGCTAGAGTGAAGTATATTTATCATGTAGGACAGATTGAGCTTCCTGGGATCATAGAAGGAGGCGGATATTTGTGTGGCTGTTCAGAGTGCAATTATTCGAGAGTGCTCAGTGCCTACGAGTTTGAGCAGCATGCTGGTGCCAAGACTAGACATCCAAATAATCACATATACCTAGAGAATGGAAGACCAATATATAGTATTATACAGGAAATGAAAACTGCTCCACTCAGCTTACTGGATGAGGTTATAAAGGACGTGGTTGGTTCATCTGTCAATGAGGAATCCTTTCAGGTTTGGAAAGCGAGTCTGCTACAAAGCCATGGGAGGGCTGAAGCAGATAAATATTATGACACCAAGCTTATTGGCATGCCTCATGCAAACGTAAGTCAACATGTAGAAGGTATCAACCACATAACTCAGTCATGTGCACTGAGTCCTGTTGAGCAGCAAATTTATGTGAAGCGGACAACTGATGAGCGGAAACGTGCAATAAAGAAACCAACTTCCTATACTTCTAATTCATGTCCACAGCCAAAGAGAAGCTCTGATGGTAGCACTAAGAGAAGgGATAACGATTTGCATAGATTACTTTTTATGCCAAATGGACTACCAGATGGTGCTGAATTGGCTTACTATGTCAAAGGACagAGATTGCTAGGAGGTTACAAACAGGGAAATGGTATAGTTTGTAGTTGTTGTGATAGAGAGATAAGCCCGTCACAGTTTGAAGCTCATGCTGGAATGGCTGCTAGACGTCAACCTTACCGTCATATATATACTTCCAATGGATTAACACTCCATGATATAGCTCTCTCATTGTCAAATGGTCAAAATGTTACCACCGGAGATAGTGATGATATGTGTGCAGTATGTGGAGATGGAGGAGATTTGATTCTTTGCAATGGATGCCCTAGGGCTTTTCATGCAGCCTGCTTGGGTTTACATTGTGTTCCAGAAAGCAGTTGGCATTGTACGGATTGCAGAGATAATGCAGGCAGTGGCAGAGAATCTTCTGGTACTGGAAGGCCAATCATGATACGGTTGACACGGGTTGTTAAGTCACCAGAATTTGAAATGGGTGGTTGTGTTGTTTGCAGggagcATGATTTCAGTGTTTCTAAATTTGATGATCGAACAGTTATAATTTGTGATCAGTGTGAGAAGGAGTATCATGTTGGTTGCTTGCGAGACAGTGGGTTATGTGAGCTGAAAGAACTGCCCAAAGATAAGTGGTTTTGTCGTGATGACTGTAACAGAATATATGTGGCTCTACAGAATTCAGTTTCCACTGGAGCAAAGGTTGTACCAGCTTCCATATCAGATATAATAAACAGGAAGCATGAAGAGAGAGGTTTATTTATCAATGGAGGCATGGGTGACATCCAATGGCGAATTCTAAGTGGAAAAAGTCGTTATCCAGAGCATTTGCCATTACTTTCACGGGCTGCTGCTATTTTTCGAGAGTGTTTTGATCCCATTGTTGCAGTATCGGGCCGTGACCTGATTCCTGTTATGGTTTATGGGAGAAATATATCAGGGCAAGAGTTCGGGGGAATGTATTGCGTTGTTTTAATAGTGAAGTCTGTTGTAGTATCTGCTGGGCTTCTTAGGATATTTGGCCGAAATGTTGCTGAGCTTCCGCTGGTAGCTACTAGCAGAAAGTATCAAGGAAAAGGTTATTTTCAAGTATTATTCTCTTGCATAGAGAGGCTACTCTCTTCCCTGAGTGTGGAAAAGCTGGTGCTTCCAGCAGCTGGGGATGCCGAATCAATTTGGACTAAGAAATTAGGCTTCCGAAAGATCAGTGAAGATCAGTTATCCAAATATCTGAGAGAGGTGCAGCTAACCCTCTTCAATAAAACTTCAATGCTCGAGAAGACAGTGGAACAAACAACAGAATG 2618 0.4179 MGEAAICVEVLADGRREDNEVSRTELKRDCQCLADAELDQSPSKKQAKEVSNDDVRSEVSNPHTSPKENALTFQDISSQPAELENTNQAECGEVTSTCLENSSSDETLSDGGANQTNTSQNEKDTSTSCVVLEIPKHASTTGIRKITFKFSKKKEDYNYNSPATTYQHPYGFHDDDEEPYGRAYSNTGTLESSYGMDYVRNGDFNLYARNMEFKMSKKVVPNCYPTNVKRLLSTGILDGARVKYIYHVGQIELPGIIEGGGYLCGCSECNYSRVLSAYEFEQHAGAKTRHPNNHIYLENGRPIYSIIQEMKTAPLSLLDEVIKDVVGSSVNEESFQVWKASLLQSHGRAEADKYYDTKLIGMPHANVSQHVEGINHITQSCALSPVEQQIYVKRTTDERKRAIKKPTSYTSNSCPQPKRSSDGSTKRRDNDLHRLLFMPNGLPDGAELAYYVKGQRLLGGYKQGNGIVCSCCDREISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLSNGQNVTTGDSDDMCAVCGDGGDLILCNGCPRAFHAACLGLHCVPESSWHCTDCRDNAGSGRESSGTGRPIMIRLTRVVKSPEFEMGGCVVCREHDFSVSKFDDRTVIICDQCEKEYHVGCLRDSGLCELKELPKDKWFCRDDCNRIYVALQNSVSTGAKVVPASISDIINRKHEERGLFINGGMGDIQWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVAVSGRDLIPVMVYGRNISGQEFGGMYCVVLIVKSVVVSAGLLRIFGRNVAELPLVATSRKYQGKGYFQVLFSCIERLLSSLSVEKLVLPAAGDAESIWTKKLGFRKISEDQLSKYLREVQLTLFNKTSMLEKTVEQTTE 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02681 872 Pfam Tify domain binding domain 460 509 IPR032308 -
Bva04g02681 872 Pfam Tify domain binding domain 255 310 IPR032308 -
Bva04g02681 872 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 756 842 IPR016181 -
Bva04g02681 872 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 514 585 IPR013083 -
Bva04g02681 872 SMART PHD_3 600 656 IPR001965 -
Bva04g02681 872 SMART PHD_3 526 567 IPR001965 -
Bva04g02681 872 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 597 659 IPR013083 -
Bva04g02681 872 SUPERFAMILY FYVE/PHD zinc finger 598 654 IPR011011 -
Bva04g02681 872 MobiDBLite consensus disorder prediction 100 126 - -
Bva04g02681 872 MobiDBLite consensus disorder prediction 57 71 - -
Bva04g02681 872 MobiDBLite consensus disorder prediction 41 56 - -
Bva04g02681 872 ProSitePatterns Zinc finger PHD-type signature. 527 566 IPR019786 -
Bva04g02681 872 MobiDBLite consensus disorder prediction 406 420 - -
Bva04g02681 872 ProSiteProfiles Zinc finger PHD-type profile. 524 569 IPR019787 -
Bva04g02681 872 CDD PHD1_AIRE 526 566 - -
Bva04g02681 872 PANTHER AUTOIMMUNE REGULATOR 27 869 - -
Bva04g02681 872 MobiDBLite consensus disorder prediction 395 430 - -
Bva04g02681 872 Gene3D - 697 866 - -
Bva04g02681 872 MobiDBLite consensus disorder prediction 38 71 - -
Bva04g02681 872 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 27 869 - -
Bva04g02681 872 SUPERFAMILY FYVE/PHD zinc finger 522 569 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02681 Bva-Chr4 23529737 23537690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02681 1 872 PHD Transcription Factor Family AT3G53680 53.777 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02681 - - gmx:100808999 1388.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02681 04 23529737 23537690 Bva04g02681 04 23529737 23537690 ECH