Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02668 atggagACGCAGCGGATTATCGAATTTCCTCACAAGAACATGGACAAGCGGCCCAGGAAGAGGCCTCGCTTAACATGGGATATGCCCCCTCATCTTCCTCCACCTCCTAAGGTTCTCCCTGCTATATATTGCAGTCAAGAGGTTGGAAATGGAGTTGTTCCAAATCATGCATATTCGTCCATGTTCTACAGGGGAGTGCCTCGGAATGGATCACccccttggagacctgatgatAAGGATGGTCACTATGTTTTTGCCGTTGGAGAAAATTTAACTCCTCGATACCGCATTATCAGTAAAATGGGTGAAGGGACTTTTGGCCAGGTCTTGGAATGTTTtgacaatgaaaagaaagaaatggtgGCAATCAAAATTGTTCGTTCCATACACAAGTATCGTGAGGCTGCAATGATTGAAATTGATGTCCTGCAGAGGCTTGCCAGGCATGATGTTGGTGGGGCACGTTGTGTGCAAATACGGAATTGGTTTGACTATCGTAATCATATTTGTATTGTATTTGAGAAGCTTGGACCAAGCTTATACGATTTTCTCCGCAAAAACAGCTATCGTTCTTTTCCCATTGACCTTGTTCGGGAGTTTGGCAGACAACTTTTGGAGTCTGTAGCATTTATGCATGAGTTACATTTGATTCACACCGATTTGAAGCCTGAGAATATTCTTCTCGTATCACCAGATTATATTAAAGTTCCAGACTACAAGTTTCTAGCACGCACCACAAACACAAAAGATGGCTCCTATTTCAAGAACTTACCTAAGTCAAGTGCCATTAAGCTCATTGATTTCGGGAGTACAACGTTTGAACATCAAGATCACAGTTATGTGGTGTCGACGAGACACTACCGTGCACCAGAGGTTATCTTAGGTCTTGGATGGAATTATCCTTGTGATCTTTGGAGTGTGGGTTGCATACTGGTTGAACTTTGTTCTGGTGAGGCGCTTTTCCAAACACATGAAAACTTGGAACATCTAGCCATGATGGAGAGGGTTTTAGGGCCGTTACCCCATCATATGGTGGTCCGGGCTGATCGCAGGGCTGAGAAGTATTTTAGAAGGGGACCAAGGGGTGGTGCACGATTGAGTTGGCCAGATAGTTCAACATCAAGGGAAAGCATGAGGGCAGTTTGGAAGTTGCCTCGCTTACCGAACCTTATAATGCAGCATGTTGATCATTCTGCCGGTGATTTGATTGACCTCTTGCAAGGGCTTCTACAATATGAGCCTGCACAAAGGCTCAAAGCCAGGGAAGCGCTAAGACATCCCTTCTTCACGAAAGATCCTAAAAGATACTGTTACCCATTATA 1322 0.4281 METQRIIEFPHKNMDKRPRKRPRLTWDMPPHLPPPPKVLPAIYCSQEVGNGVVPNHAYSSMFYRGVPRNGSPPWRPDDKDGHYVFAVGENLTPRYRIISKMGEGTFGQVLECFDNEKKEMVAIKIVRSIHKYREAAMIEIDVLQRLARHDVGGARCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHELHLIHTDLKPENILLVSPDYIKVPDYKFLARTTNTKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVVRADRRAEKYFRRGPRGGARLSWPDSSTSRESMRAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLQYEPAQRLKAREALRHPFFTKDPKRYCYPL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02668 440 CDD PKc_CLK 82 429 - -
Bva04g02668 440 PANTHER BNAA07G37640D PROTEIN 1 432 - -
Bva04g02668 440 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 432 - -
Bva04g02668 440 Gene3D Transferase(Phosphotransferase) domain 1 149 429 - -
Bva04g02668 440 SUPERFAMILY Protein kinase-like (PK-like) 82 435 IPR011009 -
Bva04g02668 440 ProSiteProfiles Protein kinase domain profile. 95 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02668 440 SMART serkin_6 95 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02668 440 Gene3D Phosphorylase Kinase; domain 1 82 175 - -
Bva04g02668 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Bva04g02668 440 Pfam Protein kinase domain 95 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02668 Bva-Chr4 23469609 23474090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02668 95 435 Core Cell Cycle Gene Families AT1G76540 26.554 2.71e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Bva04g02668 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02668 K08287 - tcc:18597826 799.66