Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02641 ATGGTTGGATCCTGCTGGAAACCTTCTACAGAGGGTGATGATGGAGATGTAAACGGGAGAGTTGATGGGTTGCTTTGGTATAAGGATTTAGGGAACCATCTTTATGGGGAATATTCAATGGCTGTTGTTCAAGCTAACAGCTCAATTGAAGATCGAAGCCAACTTGAATCTGGGCCCTTGAGTTTCAATCATGAGGGTCCTCAAGGGACCTTCATAGGGGTATATGATGGCCATGGTGGATTTGAGGCCTCGCAGTTTGTCAGTGAAAATCTTCTAAGCAATCTCAAGAGGATTGTAGGTGAAGATGAAAACATGTCAGAAGATGTTATTAAGAGGGCATTTTCTGCAACAGAGGAAGGTTTTCTCTCTCTGGTGAAGAAGCAGTGGCGTAGCAATCCCAATATTGCATCCACTGGGACATGTTGCTTGGCAGGGATCATTTGCAATGACATGTTATATATTGCAAATGTTGGAGACTCGAGGGTTGTGTTAGGAAGAGTAGAGAGGGGAACGAAGGTAGTCGGAGCTATTCAGTTATCTGCAGAACACAATGTGAACATAGAGACCGTAAGAGAAGAAGTTAGATCAAAGCACCCTTATGATTCAGAAATCGTGGTTATGAAAAACACGGTTTGGCGTGTTAAAGGCCTCATACAGGTTTCAAGATCGATAGGTGATGCATATTTGAAAAGGGCAGAATTTAACAGAGAGCCTCTACCATACAAATATAGAGTTCCTGAACCCTACTTCAAGCCAATTCTTAGTTGGGAGCCATCAACTTCAACGCATAGAGTCCATGCTGATGATCAATTTCTGATCTTTGCTTCTGATGGTTTATGGGAGCATCTTAGCAACCAAGAGGCTGTGAACATAGTCAACAATTACCCACGAAATGGAATTGCCAAGAGGCTCGTGAAAGCTGCACTACGAGAAGCAGCtaagaagagagaaatgagaTTCTCAGATCTGGAGAGGATTGAACAAGGGATGAGGAGAGACTTCCATGATGATATAACTGTCATAGTTGTAtttctaaatcctaaactcACTGATAGTACTTCTTCTCTTTCGGGTTCCCCTCTTTCTATCAGAGCTCCTGCCAATCCCTA 1109 0.4184 MVGSCWKPSTEGDDGDVNGRVDGLLWYKDLGNHLYGEYSMAVVQANSSIEDRSQLESGPLSFNHEGPQGTFIGVYDGHGGFEASQFVSENLLSNLKRIVGEDENMSEDVIKRAFSATEEGFLSLVKKQWRSNPNIASTGTCCLAGIICNDMLYIANVGDSRVVLGRVERGTKVVGAIQLSAEHNVNIETVREEVRSKHPYDSEIVVMKNTVWRVKGLIQVSRSIGDAYLKRAEFNREPLPYKYRVPEPYFKPILSWEPSTSTHRVHADDQFLIFASDGLWEHLSNQEAVNIVNNYPRNGIAKRLVKAALREAAKKREMRFSDLERIEQGMRRDFHDDITVIVVFLNPKLTDSTSSLSGSPLSIRAPANP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02641 369 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Bva04g02641 369 SUPERFAMILY PP2C-like 41 346 IPR036457 -
Bva04g02641 369 SMART PP2C_4 31 343 IPR001932 -
Bva04g02641 369 PANTHER ALPHABET, ISOFORM E-RELATED 3 365 - -
Bva04g02641 369 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 365 - -
Bva04g02641 369 CDD PP2Cc 35 345 IPR001932 -
Bva04g02641 369 Pfam Protein phosphatase 2C 67 314 IPR001932 -
Bva04g02641 369 Gene3D - 28 354 IPR036457 -
Bva04g02641 369 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02641 Bva-Chr4 23359868 23362056 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02641 1 355 PP2C-type Phosphatase Gene Family AT3G12620 64.804 1.52e-179 501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02641 04 23359868 23362056 Bva13g01884 13 15386260 15388586 BWGD