Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02636 ATGGGTTGGATTCCCTGTTCTGGAAATTCAAACActaagaagaagataaagaagaagatgaagaatatGAAAGTGGAGGATAATCTGTCTGATCAGATCAAGCAGGCACCAGGTACCGGGAAATCGAAGACTAGTGACGGCTCTAAAAATGGGAATCCTGATCACATTGCAGCCCAGACTTTCACGTTCCGCGAGTTGGCAACTGCTACTAGAAATTTTAGAACAGAATCTCTTTTGGGGGAGGGTGGTTTTGGTAGAGTACACAAAGGGCGTCTGGAAAGTACTAATCAGGTTGTAGCAATTAAACAACTTGACCGAAATGGGCTGCAAGGGAATAGAGAGTTCCTTGTGGAAGTGTTGATGTTAAGTCTACTCCACCACCCTAACCTTGTAAACCTTATTGGTTATTGTGCTGACGGAGATCAAAGGCTTCTAGTTTATGAATATATGCCGTTAGGATCCTTGGAAGATCACTTACATGATATTTCTCCTGGAAAGAAACGACTTGACTGGAATACGCGAATGAAAATAGCTGCTGGGGCAGCAAGGGGATTGGAATATCTTCACGACAAAGCTAACCCTCCTGTCATATACCGAGATTTAAAGTGCTCGAACATTTTACTTGGTGAAGGCTATCATCCAAAGTTATCTGATTTTGGCTTAGCTAAACTTGGACCAGTTGGGGAAAACACCCATGTATCAACTAGGGTTATGGGCACCTACGGATATTGTGCTCCGGAATATGCAATGACAGGTCAATTGACTCTCAAATcagatgtttatagttttggcATAGTTCTTCTGGAAATAATTACTGGAAGGAAAGCAATTGACAATTCAAAAGCTGCAGGAGAGCAGAATCTTGTTGCATGGgCTAGACCCTTGTTTAAAGATCgaagaaaattttcacaaatggCTGATCCAATGCTTCAAGGCCAGTATCCTTCAAGAGGCTTATACCAAGCCCTTGCCGTTGCAGCAATGTGTGTACAGGAGCAGGCCAATATGCGCCCAGTTATAGCTGATGTTGTGACAGCTTTAACTTATCTTGCTTCACAAAAATATGACCCCAATGCAGAGACAGTCCAAAGTTCCCGCCTTGCCCCTCCTACTCCTCCTAGAACCAAGAGGGGACAATG 1139 0.4109 MGWIPCSGNSNTKKKIKKKMKNMKVEDNLSDQIKQAPGKSKTSDGSKNGNPDHIAAQTFTFRELATATRNFRTESLLGEGGFGRVHKGRLESTNQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDISPGKKRLDWNTRMKIAAGAARGLEYLHDKANPPVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGIVLLEIITGRKAIDNSKAAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPSRGLYQALAVAAMCVQEQANMRPVIADVVTALTYLASQKYDPNAETVQSSRLAPPTPPRTKRGQ 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02636 377 ProSiteProfiles Protein kinase domain profile. 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02636 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Bva04g02636 377 MobiDBLite consensus disorder prediction 356 377 - -
Bva04g02636 377 Gene3D Transferase(Phosphotransferase) domain 1 148 365 - -
Bva04g02636 377 MobiDBLite consensus disorder prediction 1 53 - -
Bva04g02636 377 PANTHER OS07G0668900 PROTEIN 1 375 - -
Bva04g02636 377 CDD STKc_IRAK 77 346 - -
Bva04g02636 377 MobiDBLite consensus disorder prediction 33 53 - -
Bva04g02636 377 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 375 - -
Bva04g02636 377 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Bva04g02636 377 Pfam Protein tyrosine and serine/threonine kinase 74 343 IPR001245 GO:0004672|GO:0006468
Bva04g02636 377 SUPERFAMILY Protein kinase-like (PK-like) 53 345 IPR011009 -
Bva04g02636 377 SMART serkin_6 71 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02636 377 Gene3D Phosphorylase Kinase; domain 1 43 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02636 Bva-Chr4 23340510 23340728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02636 31 370 Glycoside Hydrolase AT3G07070 64.740 2.12e-163 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bva04g02636 PK_Tyr_Ser-Thr 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02636 - - gmx:100776041 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02636 04 23340510 23340728 Bva13g01893 13 15425508 15428467 BWGD