Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02635 ATGAATGTGAAGGAAGCAGAAAGAGTAACTGTTGCTAAACCAGTTGCTTCTAGACCTAGTTGCTCTACTTTCAGATCGTTCTCAGAGCTACTTGCCGGTGCCATCAATGATGGGTCTCCTCCAACTACAGTCGCAGCCATTAGGCCAAAGACAGTGAGATTCAAGCCGGCAATGAATCGCGCTGCCCCTGCCggattcctttcttttcagGCTGATTTATCTGAAACTGCACCTTGTAACTCTTCTGACAAGACCTCAGAACCAGACACTAGACAGTCTGTGATATACAAGCCAAAGGCGAAACTAGTATCAAAGTCCACTGTTTCTCTTTTGGTAAATATGGGAAACTGCTTTTCTGGTCAGTCACAACCAGGGCAATCGATGAAAGCTTGTCTGCAATATGTCAACACAGAGaagtttaaaacaaatttgagCTCAAATGTTGTTCAGATTCAGAGTAGCACTCTTCACGCTCGTGCTGATTTAAATCAGACAAGTGAAGCCAGTAAGGTAGTATCACATAACCAAGAGGAGGACCCAAAGACTTTGCCATCCACAAGTAATGCCAATGGTGATCGACCTTCTTATGATGGATACAACTGGAGGAAATATGGTCAGAAGCAAGTTAAGGGAAGCGAGTATCCGCGGAGTTACTATAAATGCACATTTCCTAATTGTCCAGTGAAGAAGAAAGTTGAACGGTCATTTGATGGACAGATTGAAGAAATTGTTTATAAAGGTGAGCATGACCACTCAAAGCCTCAGCCTCCTAAACGCAACTCAGCAGTGTCACAAGAGTCAGGACCAGGATTCGTATCTGATGTATTGGCTCAAAATGCTGACAACAATTTATGGAGTAATAGTAATACTAATTACCCAGATGAGAGGAATGAAAGCAGAATTGAGAATCAGAATGATACAGGACTATCTGCACATTCAACTTATCAGGTCAAGGCTCCACAGGCTAATGATTCTGGTGTAACTGTTGCCATTAATGCCAGTGGAGTAACCCCTGAAAATTCCTTTGGTCTTAGTGGGGAATGTGAGGAAGGAAGCAAAGGATTTGAGGCAGAAGAAGATGAACCCAGAAgtaaaaaaagGAAAAAAGACAATCAATCTAATGAAGCAGCAGTGTCAGAGGAAAGTTTAATAGAGCCTCGCATTGTGGTACAAAATCCTACAAATTCTGAAATGGTCGGAGATGGCTTTCGGTGGAGGAAATATGGGCAAAAGGCCGTGAAGGGCAATCCATATCCCAGGAGTTATTATAGATGCACTAATACAAAGTGTAACATGCGGAAGCACGTGGAAAGGGCAATAGATGACCCAAGTGCACTCATCACTACATATGAGGGAAAGCACAACCATGAATGCCAATG 1379 0.4177 MNVKEAERVTVAKPVASRPSCSTFRSFSELLAGAINDGSPPTTVAAIRPKTVRFKPAMNRAAPAGFLSFQADLSETAPCNSSDKTSEPDTRQSVIYKPKAKLVSKSTVSLLVNMGNCFSGQSQPGQSMKACLQYVNTEKFKTNLSSNVVQIQSSTLHARADLNQTSEASKVVSHNQEEDPKTLPSTSNANGDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTFPNCPVKKKVERSFDGQIEEIVYKGEHDHSKPQPPKRNSAVSQESGPGFVSDVLAQNADNNLWSNSNTNYPDERNESRIENQNDTGLSAHSTYQVKAPQANDSGVTVAINASGVTPENSFGLSGECEEGSKGFEAEEDEPRSKKRKKDNQSNEAAVSEESLIEPRIVVQNPTNSEMVGDGFRWRKYGQKAVKGNPYPRSYYRCTNTKCNMRKHVERAIDDPSALITTYEGKHNHECQ 459
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02635 459 ProSiteProfiles WRKY domain profile. 197 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g02635 459 Gene3D WRKY domain 180 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g02635 459 Gene3D WRKY domain 385 458 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g02635 459 ProSiteProfiles WRKY domain profile. 394 459 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g02635 459 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 21 457 IPR044810 GO:0003700
Bva04g02635 459 SUPERFAMILY WRKY DNA-binding domain 394 457 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g02635 459 Pfam WRKY DNA -binding domain 401 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g02635 459 Pfam WRKY DNA -binding domain 197 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g02635 459 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 21 457 - -
Bva04g02635 459 MobiDBLite consensus disorder prediction 246 269 - -
Bva04g02635 459 MobiDBLite consensus disorder prediction 336 382 - -
Bva04g02635 459 MobiDBLite consensus disorder prediction 356 375 - -
Bva04g02635 459 MobiDBLite consensus disorder prediction 178 194 - -
Bva04g02635 459 MobiDBLite consensus disorder prediction 167 201 - -
Bva04g02635 459 SUPERFAMILY WRKY DNA-binding domain 194 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g02635 459 SMART WRKY_cls 195 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g02635 459 SMART WRKY_cls 399 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva04g02635 Bva-Chr4 23335164 23339132 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02635 89 456 WRKY Transcription Factor Family AT2G37260 43.883 3.76e-83 258
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva04g02635 WRKY 3.2e-25 CL0274