Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02634 ATGACAAGGGATATCCTGATGAGCGTTGATGGCGATGATAAGGACTTGCAAGAATTGACTCAGTGTCCGCAAAATGGGAAGAAAAGATTTGAAGGTGGAGTTGCTGGTGGGGAACACAGTTTACATAAGGATGATGAGTTGAAAAGTAATGGGATAGCTGAAGAAGTCGGTGTTGGTAAGGGGGGGACTGTGGATGCCCCTGTCGTCCAGCATATACCACAGCAACAATCTCAAGGGGCAGTTGTTTGTTGGGAGAGGTTTCTACACCTTAGGTCCCTAAAAGTCCTTCTTGTGGAGAATGATGACTCTACTCGCCATGTTGTCACTGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCTAATGGATTGCAAGCATGGAAGATATTGCAGGATCTGACCAATCATATTGATCTTGTTTTAACTGAGGTGGCAATGCCTTGCTTATCAGGCATTGGTCTTCTATGCAAGATCATGGACCACAGAACACGTAAAAACATTCCTGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAGGGGTGCTATTGACTTTCTGGTGAAGCCCATACGGAAGAATGAGCTTAAAAACCTCTGGCAGCATGTTTGGAGGAGATGCCATAGTTCTAGTGGGAGTGGGAGTGGAAGTGGGAGTGAAAGTGGCACACAAACCCAGAAATCTATAAAATCAAAGGGTCTTGAGAAGTCTGGTAACAACACTGGCAGCAATGATGAGGATGACAATGGAAGTGTTGGTCTGAATAATGGAGATGGAAGTGACGATGGTAGTGGCACTCAGaGTTCCTGGACCAAACAAGCTGTCGAAGTTGAGAGTCCCAAACCAGTGTCTCAATGGGATCATTTTGCCGAATGCCCTGATAGCACTTGTGCTCAAGTTGTTCATTCTAATGCTGAAGTTTGTAGGAATACTATGGTTTTAGCCACAAAGGACTGTCCAGAAAAGAAGGAACAGCTTGAACTAAAAGTTGACCCGAGTAAAGATGTTGACTTAGTTCTGGAGTACAGAAATGAGGTTCCGGTCAAAACTGCGGgtgcaaaacaaaataaatcaattgatGTATGTTCCTCCAAGTTCAATGAGCATATTAATAGAGGACAGCTGGACCTTAACTGTGAGAATCTGCCTAGCAAGCCCAGGTGCAAAGGACCTTCACTTTCTGATGGCATTAATAGCACTTCTAATTCCCAGATGCATGGTGGAGATTTTGAGACCCCAATTAGAAGAGCTAAGACCTCAGATATCGAAATTAAATCTACTAACAAGAATGAAGAATTTCCATCTCTTGAGCTCAGTTTAAAGAGACTTAGAGGGGTTAAAGATTCGGGGATTACAATTAAGGATGAACGAAATGTTTTAAGACGTTCAGATCTTTCAGCCTTCTCAAGGTACAATGCTGCGTCAAATGCAAAAAAGTCTCCTACTGGACGTGTTGGAAGCAATTCCCCACATGATAATAGCTTAGAAGTTACAAAGAAAGATTCATCACGTGACCTTCAGTCTCATTCTAGCAGTAATCCTCCAAACCAGAACTCAAATGGCGCAAGCAACAACATCGATATGGGTTCCACTACTAATAATGCTTTTACTAAATCTGAAATTATCAGTGAGCCAGCGGTTGCATCAACAACCAAATGTTTGTATCAGTCATCTGCTTTCCAGCCTATAAAGAAGAACATTATATGTACCTCCCAGCAAGTTGCATCACATAACAATGGCAAGATGACTGCTACAACTATGCTGGCACCTCCAAGAGGAGTTACGCACAAGGATTCTACAATTCAGGACTTCCATTGTCATTATGAAAACCATAACTGTATTGCTAACCACCTGCAACACCAGCTGCCATCTGATCACGATGATGcatcaataaagaaaatggcTGCTGCTGCACCACATTGTGGGTCATCAAATGTAGTGGAAGTTCTCATTGAAGGTAACATGGGGAATTACAGTGTCAATAGAAGTGCATCAGGCAGCAATAATGGAAGCAATGGACAAAATGGGAGCAGCACTGCAGCTAATGCTGGAGGTACGAACATAGAAAGTAACATAGAAATTGCAGGGAATAGTGGAAGCGGTGATGCTAGTGGGAGTGGAAGCGGGAGTGCTAACAGAGTAGATCAAAACACGACTTCTCAAAGAGAAGCAGCCCTAACTAAATTTCGccagaagagaaaggaaaggtgCTTCAGGAAAAAGGTCCGATATCAAAGCAGAAAGAAATTAGCCGAACAACGACCTCGGTTTCGTGGACAATTCGTGCGACAGACCTCGAATGAAGATGCAAAACTTGTAATCACAATCATCGAAGATATCAAAGCCTTACTGTATAGGGACTGGACTGTGATCACGAAGCATACTTACAGAGAAACCAATGTTTGTGCTGATAGGCTTGCCAAGGAAGCTGCTAAGGATGGCCTTACGATTCAATTGCTAGAAGCTACCCCATCATGCCTGCACTTGGATCTCCTTACTCATTTGACCTCTACCTCTTTTCTTAGGCTGTA 2555 0.4196 MTRDILMSVDGDDKDLQELTQCPQNGKKRFEGGVAGGEHSLHKDDELKSNGIAEEVGVGKGGTVDAPVVQHIPQQQSQGAVVCWERFLHLRSLKVLLVENDDSTRHVVTALLRNCSYEVIEAANGLQAWKILQDLTNHIDLVLTEVAMPCLSGIGLLCKIMDHRTRKNIPVIMMSSHDSMGLVFKCLSRGAIDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSGSGSESGTQTQKSIKSKGLEKSGNNTGSNDEDDNGSVGLNNGDGSDDGSGTQSSWTKQAVEVESPKPVSQWDHFAECPDSTCAQVVHSNAEVCRNTMVLATKDCPEKKEQLELKVDPSKDVDLVLEYRNEVPVKTAGAKQNKSIDVCSSKFNEHINRGQLDLNCENLPSKPRCKGPSLSDGINSTSNSQMHGGDFETPIRRAKTSDIEIKSTNKNEEFPSLELSLKRLRGVKDSGITIKDERNVLRRSDLSAFSRYNAASNAKKSPTGRVGSNSPHDNSLEVTKKDSSRDLQSHSSSNPPNQNSNGASNNIDMGSTTNNAFTKSEIISEPAVASTTKCLYQSSAFQPIKKNIICTSQQVASHNNGKMTATTMLAPPRGVTHKDSTIQDFHCHYENHNCIANHLQHQLPSDHDDASIKKMAAAAPHCGSSNVVEVLIEGNMGNYSVNRSASGSNNGSNGQNGSSTAANAGGTNIESNIEIAGNSGSGDASGSGSGSANRVDQNTTSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRFRGQFVRQTSNEDAKLVITIIEDIKALLYRDWTVITKHTYRETNVCADRLAKEAAKDGLTIQLLEATPSCLHLDLLTHLTSTSFLRL 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02634 851 PANTHER TWO-COMPONENT RESPONSE REGULATOR 37 761 IPR045279 GO:0009736
Bva04g02634 851 Pfam CCT motif 730 772 IPR010402 GO:0005515
Bva04g02634 851 ProSiteProfiles Response regulatory domain profile. 94 212 IPR001789 GO:0000160
Bva04g02634 851 Pfam Reverse transcriptase-like 770 818 IPR002156 GO:0003676|GO:0004523
Bva04g02634 851 MobiDBLite consensus disorder prediction 218 283 - -
Bva04g02634 851 MobiDBLite consensus disorder prediction 515 540 - -
Bva04g02634 851 MobiDBLite consensus disorder prediction 483 540 - -
Bva04g02634 851 MobiDBLite consensus disorder prediction 483 501 - -
Bva04g02634 851 MobiDBLite consensus disorder prediction 670 731 - -
Bva04g02634 851 SUPERFAMILY CheY-like 91 216 IPR011006 -
Bva04g02634 851 Pfam Response regulator receiver domain 95 206 IPR001789 GO:0000160
Bva04g02634 851 MobiDBLite consensus disorder prediction 218 287 - -
Bva04g02634 851 SMART REC_2 93 208 IPR001789 GO:0000160
Bva04g02634 851 Gene3D - 92 240 - -
Bva04g02634 851 ProSiteProfiles CCT domain profile. 730 772 IPR010402 GO:0005515
Bva04g02634 851 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 37 761 - -
Bva04g02634 851 CDD psREC_PRR 95 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02634 Bva-Chr4 23325215 23334185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02634 169 787 Response Regulator Gene Family AT5G02810 46.130 3.64e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Bva04g02634 Response_reg 1.3e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02634 K12129 - gmx:100796933 1020.38