Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02610 ATGGGGCGGAAGGGAAATTGGTTTTCTAGTGTGAAGAAAGCTCTCAGTCCCGAgtcaaaggagaaaaaagacCAGaaatcaaataaatcaaagaagaaatggtTTGGGAAGCAAAAGTTGCAGACTTCAGATTCATGCTTGGAAACTGATAAATCGCCACCACCACTCCCTCCGCcagaagagattaaattaactGATATCGAGAATGAAAATAGTCATGCTCATGGTCATGTTGTTGAAGTTGCAACTGCTGTGGATGCTGAGGAGCCTGTTCCTGCTGTGCAGATAGAACCTGTTCCTGTTCCCGTTCCAGTTGCTGCAGTTGCTCGGGTCCAAGCAGCTAGACTTGCTCAGTTTGTTGGTAAATCAAGAGAGGAAGTGGCAGCAATCAAGATTCAAACAGCTTTTCGAGGATATTTGGCAAGAAGAGCATTGCGAGCTTTAAGAGGGCTGGTCAGGCTGAAAGCATTGATGGAAGGGCCAATTGTAAAACGCCAAGCCACTAGTACCCTCCGCACTATGCAGACTTTATCTCGTGTGCAATCTCAGATTCGTTCTAGGAGGATGAGGATGTTAGAGGAGAATCAGGCTCTGCAGAGACAACTCATGCAGAAGCACGCGAAAGAGCTTGAGAGCCTGCGGATTGAGGAGGAATGGGATGACAGCCTTCAATCAAAGGAACAAATTGAAGCCAAGTTATTTGGCAAGTATGAGGCTGCtatgagaagagaaagagcatTGGCATATGCATACTCTCATCAGCAAACCTGGAAGAATACATCCAAATCTATAAATCCATTTTTCATGGATCCAACCAATCCTGCCTGGGGTTGGAGCTGGCTAGAACGATGGACAGCAGCCCGGCCCGGGGAGAGCCGAAGCCAGATGGAGAAGGAAGAGGTTTCATCTGTAAGAGGTTCTAGCCGCAGCTTAACTGCTGCAGAAATCATCAAATCATACGCCCGTTATCAACTCAATTCTGAAAAGCATTCTCCAACAGCCAGCCAAACTCCAGGCTCACCAAGCTTTAAGCCCCAATCAACTCCTTCCAAGGCAGCTTCTAGTTCTTCAGCTATTGCCAAAAAACTGAAGAAAGTGAACCCAAAAGATAGTTGGGCTATGGATGATGACTCTAAAAGCATGGTGAGCGTGCAGTCGCGGAGGCACTCCATTGCTGGGTCATCGGTGAGAGATGATGAGAGCCTTGCAAGCTCTCCATCAGTTCCAAGTTACATGGTGCCAACACAATCTGCAAAAGCCAAGTCCAGGCTGCAAAGTCCACTAGCCACAGAGAACGGGACACCAGAGAAAGGTTCATTTGGGACTGCAAAGAAAAGGCTTTCTTTTCCCCAATCACCAGCCAGGCCAAGGCGACATTCAGGTCCACCAAGGGTAGGAAGCAGCTTAAATGGACAAATCACCGTGGGCAATGGCGTAACCAGTTG 1445 0.4554 MGRKGNWFSSVKKALSPESKEKKDQKSNKSKKKWFGKQKLQTSDSCLETDKSPPPLPPPEEIKLTDIENENSHAHGHVVEVATAVDAEEPVPAVQIEPVPVPVPVAAVARVQAARLAQFVGKSREEVAAIKIQTAFRGYLARRALRALRGLVRLKALMEGPIVKRQATSTLRTMQTLSRVQSQIRSRRMRMLEENQALQRQLMQKHAKELESLRIEEEWDDSLQSKEQIEAKLFGKYEAAMRRERALAYAYSHQQTWKNTSKSINPFFMDPTNPAWGWSWLERWTAARPGESRSQMEKEEVSSVRGSSRSLTAAEIIKSYARYQLNSEKHSPTASQTPGSPSFKPQSTPSKAASSSSAIAKKLKKVNPKDSWAMDDDSKSMVSVQSRRHSIAGSSVRDDESLASSPSVPSYMVPTQSAKAKSRLQSPLATENGTPEKGSFGTAKKRLSFPQSPARPRRHSGPPRVGSSLNGQITVGNGVTS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02610 481 Pfam Protein of unknown function (DUF4005) 402 456 IPR025064 -
Bva04g02610 481 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 476 - -
Bva04g02610 481 Gene3D iswi atpase 122 159 - -
Bva04g02610 481 PANTHER IQ-DOMAIN 5-RELATED 1 476 - -
Bva04g02610 481 MobiDBLite consensus disorder prediction 1 60 - -
Bva04g02610 481 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
Bva04g02610 481 MobiDBLite consensus disorder prediction 465 481 - -
Bva04g02610 481 SMART iq_5 124 146 IPR000048 GO:0005515
Bva04g02610 481 MobiDBLite consensus disorder prediction 326 361 - -
Bva04g02610 481 MobiDBLite consensus disorder prediction 378 437 - -
Bva04g02610 481 Pfam IQ calmodulin-binding motif 128 146 IPR000048 GO:0005515
Bva04g02610 481 MobiDBLite consensus disorder prediction 289 308 - -
Bva04g02610 481 MobiDBLite consensus disorder prediction 326 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02610 Bva-Chr4 23212970 23216074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02610 1 481 IQD Protein Family AT5G03040 51.587 2.89e-145 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02610 - - gmx:100800080 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02610 04 23212970 23216074 Bva04g02610 04 23212970 23216074 ECH