Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02600 ATGGCCGATGACTTTGACTTCGCCGATAAAGTTCCTCCTTCCTTCGATCACGTGGGAGATGTGCTGAAGAATTCTGAAGCCAAAGGGTTCAACCCGGCATTGATAGTTCTGCTGCTTGTTGTTGGGTTGCTGGTGGTATTCCTGGTTGGAAATTATGTACTCTACGCGTATGCACAGAAGACTCTTCCTCCTAGAAAGAAGAAGCCAGTTTCGAAGAAGAAGTTGAGAAAGGAGAAACTGAAGCAAGGCATCTCTGCACCTGGAGAATG 269 0.4684 MADDFDFADKVPPSFDHVGDVLKNSEAKGFNPALIVLLLVVGLLVVFLVGNYVLYAYAQKTLPPRKKKPVSKKKLRKEKLKQGISAPGE 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02600 89 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 89 - -
Bva04g02600 89 PANTHER DNA-BINDING PROTEIN S1FA2 3 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
Bva04g02600 89 MobiDBLite consensus disorder prediction 67 89 - -
Bva04g02600 89 Pfam DNA binding protein S1FA 25 89 IPR006779 GO:0003677|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02600 Bva-Chr4 23178862 23180513 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Bva04g02600 S1FA 4.6e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02600 - - gmx:100499820 108.227