Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02594 ATGAGCGTGATCGACATTCTAACAAGAGTAGATTCGATTTGCAAGAAGTACGACAAATACGACGTTGATAAGCAGAGGGATTCTAACATCTCCGGCGAAGATGCATTTGCTCGGCAATACGCTCTCGTCGAAGCCGACATCGAGGCCGCACTTGAGAAAGCAGAAACTGCTACCAAGGAGAAAAGTAGGGCATCTACCGTAGCGATCAATGCGGAGATTCGTCGTACTAAGGCTCGGTTGCTGGAGGAGGTTCCCAAGTTGCAGAGATTGGCTATGAAAAAGGTAAAGGGGCTTTCATCGGAAGAATTTGCTGCTCGTAATGATTTGGTTCTTGCATTGCCAGAGAGGATCCAAGCTATTCCAGACGGGACTCCTGCTGCACCCAAACAAACTGGAGGCTGGGCATCTTCTGCTTCACGtacagaaattaaatttgattatgATGGGCAATTTGACAATGAATACTTCCAACAAACTGAGGAATCAAGTCAATTCAGGCAGGAGTATGAAATGCGGAGAATCAAGCAGGATCAAGGTTTGGATATGATCTCAGAAGGCTTGGATACATTGAAAAACATGGCACATGATATGAACGAGGAAATGGATAGACAAGTTCCATTGATGGACGAGATTGATACGAAGGTGGACAAGGCATCTTCTGACCTCAAGAATACCAATGTCAGACTTAAGCATACAGTTAACCAGCTTCGATCCAGTCGAAACTTCTGTATCGATATAGTTTTGTTGTGTATAGTACTGGGAATTGCTGCCTATTTATACAATGtactaaagaaata 797 0.4279 MSVIDILTRVDSICKKYDKYDVDKQRDSNISGEDAFARQYALVEADIEAALEKAETATKEKSRASTVAINAEIRRTKARLLEEVPKLQRLAMKKVKGLSSEEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWASSASRTEIKFDYDGQFDNEYFQQTEESSQFRQEYEMRRIKQDQGLDMISEGLDTLKNMAHDMNEEMDRQVPLMDEIDTKVDKASSDLKNTNVRLKHTVNQLRSSRNFCIDIVLLCIVLGIAAYLYNVLKK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02594 265 PANTHER SYNTAXIN-73 1 261 - -
Bva04g02594 265 SMART tSNARE_6 165 232 IPR000727 -
Bva04g02594 265 CDD SNARE_Qc 175 231 - -
Bva04g02594 265 Gene3D - 170 231 - -
Bva04g02594 265 SUPERFAMILY SNARE fusion complex 163 230 - -
Bva04g02594 265 Coils Coil 40 60 - -
Bva04g02594 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 170 232 IPR000727 -
Bva04g02594 265 PANTHER SYNTAXIN 1 261 IPR045242 -
Bva04g02594 265 Pfam SNARE domain 207 256 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02594 Bva-Chr4 23147378 23150811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02594 1 264 SNARE and Associated Proteins AT3G09740 80.075 8.91e-160 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02594 K08506 - pvy:116143117 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02594 04 23147378 23150811 Bva04g02594 04 23147378 23150811 ECH