Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02593 ATGACGGAGAAAAATCCCAGTTTAGATATTCAACTTCCCCCTGGATTTAGATTCCACCCATCTGATGAGGAGCTCATTGTTCACTATCTCAGAAACAAAGTGACTTCTTGTCCACTCCCTGCTTCTTTCATAGCAGAAATAGATCTTTACAAGTTTAATCCATGGGAGCTTCCAAGCAAATCTTTGTTTGGAGAGGATGAATGGTTTTTCTTCACTCCAAGGGACAGGAAGTATCCAAATGGGGTGAGGCCAAACAGAGCTGCTGGTTCAGGTTATTGGAAGGCCACAGGGGCTGATAAGCCTATTCTCACTTCGTGTGGGATGAAGAGCATTGGAGTGAAGAAAGCCCTTGTATTCTACAAGGGACGCCCTCCAAAGGGATCTAAAACAGATTGGATCATGCATGAGTATAGATTACTTGATTCAATGATCTTGAAGTCCAAGCAAAGACGGTCCATGTCCATGAGACTGGATGATTGGGTGCTATGCCGAGTTCGACAAAAAATTGGAAGCCCTAGAAGCACTTGGGAAGATTCGAGTGAATCTAACCATGATCCAGCAAGCTACTTTCAACAAATGAATATTAACCCTTATGCTGAACAGGTCAAAAATCCCATGCAGAACGAGTTCCCAATGTTACCATATATTCTGGCTACTCAGAGTTCTCTTCCTTCTATTGGTATAGCCTCAAACATCATCGTTCAATCATCTGCTTCAGTCCACGAAGAGAACTCGAATAAAATAGAAGCACAGTTCCTAGCATCTGCGACTGAAAGTTTGTTTAACCCGTTAAAGCGAACAGCGATGGAAGAAAATCAGTTGGAATTTTATTATCCTCCATATAAGAAGCTAAGCACGGGACAAGATGAGAAGGACAAGAGAGTTGAGATAACTTTAAGCAAGGGTTGCAATTTCAACAACTATGATCAGTGGAGTTCCATTATAGAACCTCAAGATCTCACTAATTTGCTTGCTTGGTCTTTCCAAGATATATA 995 0.4161 MTEKNPSLDIQLPPGFRFHPSDEELIVHYLRNKVTSCPLPASFIAEIDLYKFNPWELPSKSLFGEDEWFFFTPRDRKYPNGVRPNRAAGSGYWKATGADKPILTSCGMKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLLDSMILKSKQRRSMSMRLDDWVLCRVRQKIGSPRSTWEDSSESNHDPASYFQQMNINPYAEQVKNPMQNEFPMLPYILATQSSLPSIGIASNIIVQSSASVHEENSNKIEAQFLASATESLFNPLKRTAMEENQLEFYYPPYKKLSTGQDEKDKRVEITLSKGCNFNNYDQWSSIIEPQDLTNLLAWSFQDI 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02593 331 PANTHER NAC TRANSCRIPTION FACTOR 56 8 291 - -
Bva04g02593 331 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 8 291 - -
Bva04g02593 331 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Bva04g02593 331 ProSiteProfiles NAC domain profile. 12 168 IPR003441 GO:0003677|GO:0006355
Bva04g02593 331 Gene3D NAC domain 21 170 IPR036093 GO:0003677|GO:0006355
Bva04g02593 331 SUPERFAMILY NAC domain 10 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02593 Bva-Chr4 23145455 23146672 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02593 11 177 NAC Transcription Factor Family AT1G61110 68.208 8.71e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva04g02593 NAM 6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02593 - - lja:Lj1g3v4579400.1 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02593 04 23145455 23146672 Bva04g02593 04 23145455 23146672 ECH