Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02591 ATGCTTAATCTTCTGTATTTCTCATCCGCCATGGATGCGGTAGCGTGGAGAGGACTGCTGTACACAATCTTCATactcaattttgttttggtttgccAGCTTATCCTCCTTCAACCTCTGGTTTCTGCATTAGATGGAAAAAGTGGAAATGTTGCTGAGTTGTTTGAGAGGGTATCACAAAGTATAAAAGCAAAACGTTATAGTGAGGCACTTGATGATCTCAATGCTTCCATAGAAGCAGATCCAACCCTATCAGAAGCATACTTACGCCGTGCATCACTTCTTCGACATTTATGCAGATATGAGGAATCTGAGAGGAACTACAAAAAGTTTCTGGAGTTAAAACCCGGAGATTCAGCTGCAGAAAAAGAGCTCTCTCATTTGCTGCAGGCTCAAAGTGCCCTGGAAACAGCTCATTCTCTGTTTGATTCTGGCAACTTTACAAAATCCCTggaatatattgataaaatcgTACTTGTTTTTTCTCCTGCCTGCACGACGGCTAAACTTCTCAAAGTGAAGTTGTTGATAGCTGATAGAGAGTATGAGGGTGCCATCTCTGAGTCTGGATTTATTCTTaaggaagatgaaaataatttagaggCGTTGTTGCTACGTGGTCGAGCATACTACTATTTAGCTGATCATGATATTGCAATGAGGCATTATCAGAAAGGTCTTCGCCTAGATCCGGAGCACAGTCAACTTAAAAAAGCTTATTTTGGATTGAAAAATCTTctgaaaaagaccaaaagtGCTGAAGACAATGCTAGTAAGGGTAAGCTACGTGTAGCAGTGGAGGAATTCAAAGCAGCATTGGCAATAGACCCTAATCATCTTTCACATAATGTACATATTCATCTTGAATTATGCAAAGTATTGGTCAAACTTGGCAGAGGAAAAGAAGCTTTGGACAGTTGCAACGAAGCTCTTAAGATCAATGATAATCTCATTGAAGCTCTTGTTCAGAGAGGAGAAGCCAAGCTGTTAACAGAGGATTGGGAGGGAGCTGTAGAAGATCTGAAAGCGGCTGCTCAAAATTCCCCTCAGGACATGAATATCCGTGAAGCACTAATGAAGGCTGAGAAAGCTTTAAAGATGAGCAAACGCAAGGACTTCTACAAGATTTTGGGGATCTCCAAAACTGCTTCTGTCTCTGAGATAAAACGTGCCTACAAGAAACTTGCCTTGCAATGGCATCCAGATAAGAATGTTGACAATAGGGAGGAAGCAGAGGCTAAATTCCGAGAAATTGCTGCTGCTTATGAGGTTCTGAGCGATGAAGACAAACGCACACGATATGACAGTGGAGAAGACCTTGAAGACATGGGAATGGGTGGTGGAGGTTTCAACCCCTTTGGTGGAGGTGGGCAGCAGTTCACCTTTACTTTTGATGGAGGCTTCCCTGGTGGTGGCTTTCCTGGTGGATTTGGAGGAGGCTTTCCTGGCGGTGggtttgaatttcattttta 1472 0.4035 MLNLLYFSSAMDAVAWRGLLYTIFILNFVLVCQLILLQPLVSALDGKSGNVAELFERVSQSIKAKRYSEALDDLNASIEADPTLSEAYLRRASLLRHLCRYEESERNYKKFLELKPGDSAAEKELSHLLQAQSALETAHSLFDSGNFTKSLEYIDKIVLVFSPACTTAKLLKVKLLIADREYEGAISESGFILKEDENNLEALLLRGRAYYYLADHDIAMRHYQKGLRLDPEHSQLKKAYFGLKNLLKKTKSAEDNASKGKLRVAVEEFKAALAIDPNHLSHNVHIHLELCKVLVKLGRGKEALDSCNEALKINDNLIEALVQRGEAKLLTEDWEGAVEDLKAAAQNSPQDMNIREALMKAEKALKMSKRKDFYKILGISKTASVSEIKRAYKKLALQWHPDKNVDNREEAEAKFREIAAAYEVLSDEDKRTRYDSGEDLEDMGMGGGGFNPFGGGGQQFTFTFDGGFPGGGFPGGFGGGFPGGGFEFHF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02591 490 ProSiteProfiles dnaJ domain profile. 372 438 IPR001623 -
Bva04g02591 490 SMART dnaj_3 371 430 IPR001623 -
Bva04g02591 490 Pfam Tetratricopeptide repeat 260 323 - -
Bva04g02591 490 SMART tpr_5 51 84 IPR019734 GO:0005515
Bva04g02591 490 SMART tpr_5 85 118 IPR019734 GO:0005515
Bva04g02591 490 SMART tpr_5 318 351 IPR019734 GO:0005515
Bva04g02591 490 SMART tpr_5 200 233 IPR019734 GO:0005515
Bva04g02591 490 SMART tpr_5 284 317 IPR019734 GO:0005515
Bva04g02591 490 Pfam Tetratricopeptide repeat 201 233 IPR013105 -
Bva04g02591 490 Gene3D Tetratricopeptide repeat domain 39 369 IPR011990 GO:0005515
Bva04g02591 490 PANTHER DNAJ PROTEIN P58IPK HOMOLOG 8 490 IPR044620 -
Bva04g02591 490 SUPERFAMILY TPR-like 62 366 IPR011990 GO:0005515
Bva04g02591 490 PRINTS DnaJ domain signature 374 392 IPR001623 -
Bva04g02591 490 PRINTS DnaJ domain signature 392 407 IPR001623 -
Bva04g02591 490 PRINTS DnaJ domain signature 430 449 IPR001623 -
Bva04g02591 490 PRINTS DnaJ domain signature 410 430 IPR001623 -
Bva04g02591 490 ProSitePatterns Nt-dnaJ domain signature. 415 434 IPR018253 -
Bva04g02591 490 Pfam DnaJ domain 372 435 IPR001623 -
Bva04g02591 490 ProSiteProfiles TPR repeat profile. 200 233 IPR019734 GO:0005515
Bva04g02591 490 ProSiteProfiles TPR repeat profile. 85 118 IPR019734 GO:0005515
Bva04g02591 490 CDD DnaJ 372 427 IPR001623 -
Bva04g02591 490 Gene3D DnaJ domain 370 477 IPR036869 -
Bva04g02591 490 Pfam Tetratricopeptide repeat 63 118 - -
Bva04g02591 490 SUPERFAMILY Chaperone J-domain 365 475 IPR036869 -
Bva04g02591 490 Coils Coil 408 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02591 Bva-Chr4 23127594 23132326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02591 368 436 C2H2 Transcription Factor Family AT1G74250 47.945 2.28e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02591 K09523 - gmx:100804685 726.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02591 04 23127594 23132326 Bva04g02591 04 23127594 23132326 ECH