Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02584 ATGAAcattctttgttctttttctggtTGTTTCTCACCAGCGGAGCAATTGAACCACGACGAGCCAGAGGGAGAGAATGCTGAAGCGTTTCGTGTGTTCTCGAGCAACGAATTGAAATCTGCTACTCGTGGTTTTCACCATTCGGAAAAGGTCGGAGAAGGTGGCTTTGGCTCTGTGTACAAGGGGCGGCTTCGGGATGGCACAATGGTTGCTGTGAAAGTGCTATCCATAGAGCTAGAATCGATGCGAGGAGAGAAGGAGTTTATAGCAGAATTGACTACACTCTCACATGTCAGACACCAAAATCTTCTCCGTCTTCTAGGGTGTTGTGTAGAAGGAACTCGCAGATATTTAGTATTCGAGTACATGGAGAACAATAGCGTTCTCACAACTTTCTTGAGTACTGAGCCCAACAGGACGAAATTCAGCTGGGAAACAAGGAGAAACGTAACCATAGGTGTGGCTCGTGGCCTTGTCTATCTTCACGAGGAAGTTAAGCCTCGTATAGTGCATAGAGATATCAAAGCCGGCAATATACTTCTGGATGCAAATTTGACACCAAAGGTTTCAGATTTTGGTTTGGCAAAGTTACTCAGAGATGAAAATTCTTACATCAGTACTCGAGTTGCGGGGACATTAGGGTATCTTGCTCCAGAGTACAACAGTTCTAGACTAGTAACACGAAAATCAGATGTTTATAGCTTCGGAGTATTACTCTTAGAAATTGTTAGCGGCCGAGTAGTTGTAGATGCTTATCAAGATACAGAGAGATTCCTAGTAGAGAAGGCGTGGACCGCGTATGAAGCTGATAATCTTTTACCCATGGTGGATCCTGCGcttaatatgaattttgattcAGAAGAAGCCATAAGATTCCTAAAGGTGGGACTACTTTGTGTGCAAGAAACTGCCAAGCTTCGCCCGACAATGCCAGAAGTTGTTGAAATGTTGAGTACTAGGATGAATATGGACGATGCTCGGATTTCAAAACCAGGTTTCGTTCCTGATCTCAGGGAGGTCATGAATAGGCAGGAGCAAACCAATTTATCCCCAGAATCAAGTCCTAGTTATGCGGCAACCAGCTCCTTGTGGAGTTCGGCTAATATTGGCCGTTA 1115 0.4332 MNILCSFSGCFSPAEQLNHDEPEGENAEAFRVFSSNELKSATRGFHHSEKVGEGGFGSVYKGRLRDGTMVAVKVLSIELESMRGEKEFIAELTTLSHVRHQNLLRLLGCCVEGTRRYLVFEYMENNSVLTTFLSTEPNRTKFSWETRRNVTIGVARGLVYLHEEVKPRIVHRDIKAGNILLDANLTPKVSDFGLAKLLRDENSYISTRVAGTLGYLAPEYNSSRLVTRKSDVYSFGVLLLEIVSGRVVVDAYQDTERFLVEKAWTAYEADNLLPMVDPALNMNFDSEEAIRFLKVGLLCVQETAKLRPTMPEVVEMLSTRMNMDDARISKPGFVPDLREVMNRQEQTNLSPESSPSYAATSSLWSSANIGR 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02584 371 CDD STKc_IRAK 51 317 - -
Bva04g02584 371 SMART serkin_6 45 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02584 371 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 362 - -
Bva04g02584 371 Pfam Protein kinase domain 45 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02584 371 Gene3D Phosphorylase Kinase; domain 1 15 122 - -
Bva04g02584 371 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Bva04g02584 371 ProSiteProfiles Protein kinase domain profile. 45 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02584 371 Gene3D Transferase(Phosphotransferase) domain 1 123 330 - -
Bva04g02584 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Bva04g02584 371 PANTHER RECEPTOR-LIKE KINASE 7 362 - -
Bva04g02584 371 SUPERFAMILY Protein kinase-like (PK-like) 28 317 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02584 Bva-Chr4 23095247 23101724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02584 33 336 Receptor kinase-like Gene Family AT1G56120 49.836 1.50e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva04g02584 Pkinase 6.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02584 - - gmx:100813945 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02584 04 23095247 23101724 Bva13g01947 13 15717516 15719836 BWGD
Bva04g02584 04 23095247 23101724 Bva04g02584 04 23095247 23101724 ECH