Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02583 ATGCAAATTCTCTGTAGCTTTCTTGGGTTTTCTCGATCTTTAGTCGCTTTTCAGCTTCTACTCTTTTGCTTTACTGGCGCATATGGGTTTGGGAGGATGGGACCAATATCTGCATCGTTCGGCAAGGACGAGTTTTTCTGTGCCATCGATGCGAGTGGGAAGCAGGATGTCATATGCTGGGGGAAGAACAGTTCTCTGCCAGTTCCGCCGTCTCCTTCAGCTTCAGCCTATTTCAGCAATATCCCTGCCATGGCAGCTCTCTCTGGGGGCGAGGGATTTATGTGTGGCATTCTAGCAAACACTTCACAAGCACACTGCTGGAGCCCTACCAATCCAGGTATGGATCTCGTGCCTCCTATGTACCAAAACACTGCTTATTCTCATATTGCTGCTGGGAAGAATCATGTTTGTGCTATTAAGGGACCTTATTATGCTGATCACGATTCCGGAACTGTTGATTGTTGGGAGATTGTGACAAGTAGGAATCGTAGTTTGGCGTCCAAGCAAAGCGATTTATATTATGATCAGTCCACTAATAGTCTTGAATTGGATAAGATTGCATCCGGTGAGGGATTTACTTGTGGCGCGGTCAGAGGAGGAGGACTTGTTTGTTGGGGACCCGCTTCGACGAGTTTAGGGGTTTCGAATGTGTCAGAAAACTACGGAGTTTTAGTATCGGGAAGGAGTTCTGTTTGTGGGATTTCGAATGTTTCCGGCAATTTGAAGTGTTGGGGCGATGCCGGTTCATTTGTTGAACCACCCGTTGAGGTTTCATTGGTCTCTTTATCAGCTGGGATGAACCATTTTTGTGGTATCCGAGCTGATAACCACGCAGTCGAATGTTGGGGGAATTTCAATTCCTCTGTGGTTCCAAAAGGTTCTGGATTTATGGCAATTGCGTCTTCAGATTTTACAACCTGCGGTATCAGAGAAGATGATCTTCTTCTTGATTGCTGGCTGATAAATTCATCTAAACCTGATTTTGATACTCCACTGGAATTGTCTAGTCCGGGTCTCTGCAGAGTTAGTCCCTGTAACGAAGGAGAATTCGCTTTCAATGTGAGCGTTCTGAATGAACCAGATTTAACAAGCCTCTGCATTCGAAAAGATTTGAGGATTTGTTCACCTTGTGGGTCAAATTGTTCTCAAGGTTTATTCTTGTCTAGTCTATGTATTGAAAATGCCGATAGAGTATGCACCCCTTGTTCTCTTTGCCAGAACAGCTCTTGTTGGGATGTTTGTCAACTTAAAACATATGCACAGTTGCATCAGAAGCGTTGGAGTCATTTGCGTCGATTATTGATCATAGTCGGTTCCACTGCTTTCGGTGTCATACTGATATCAACTTGCGGGTGTCTTCTCCCTTGTTTGTTTACCAACCGGAAGTCGCAGGGGTCTAAGAAACAATCGCAATCTTGCATGGGCAAACAAGAGCAAGAAAATGACATGAATGCTGGTCTTCATTCTTCTCCTTCTACAGGTTCCTGTCCTGGGCTGCCTCAAGTTTTCCGACTCTCAGAGCTTAAAGATGCCACTAACGGCTTAAAGGAATTTAATGAACTGGGGAGGGGAAGTTACGGTTTTGTTTACAAAGCTGTATTAACAGATGGAAGGGTGGTGGCAGTCAAAAGGGCAAATGCTGCCACAATAATTCACACCAATAACCGTGACTTCGAAATGGAGCTGGAGATTCTCTGCAAAACCAGACATTGTAATATTGTGAACTTGTTGGGTTACTGTTCAGAGATGGGGGAGAGATTGCTTGTTTACGAGTACATGCCCCATGGGACGCTTTATGATCATCTCCATGGTGGGCTTTCTCCTCTCAATTGGAGCCTTAGGCTAAAGATTTCAATGCAAGCTGCAAAGGGCCTTGAGTACCTTCACAAGGAGCTGACGCCACCAATTGTTCATAGGGATGTTAAGAGTTCCAACATTCTTTTAGATTCAGAGTGGAGTGCAAGAATTGCAGACTTCGGACTTCTTACTTCAAATGACAAAGATCTTAATGGGGACCTAAAAACTGATGTTTACAACTTGGGGATTGTACTACTAGAGATTCTTAGCGGAAGAAAGGCTCATGACAGAGAGTTCACGCCTCCAAATATAGTTGAATGGGCAGTGCCTTTAATCAAACAGGGGAAGGCAGCTGCCATAATTGACAGGTATGTGGCTCTTCCAAGGAATGTTGAGCCTTTGCTCAAGCTAGCAGATATAGCAGAGCAGGCTGTGAGGGAGAATCCAAGTCAGCGTCCTTCTATCTCAGATTTAGCATCTTGGTTGGAGCAAATTGTCAAGGACGGATTGATATTATA 2315 0.4458 MQILCSFLGFSRSLVAFQLLLFCFTGAYGFGRMGPISASFGKDEFFCAIDASGKQDVICWGKNSSLPVPPSPSASAYFSNIPAMAALSGGEGFMCGILANTSQAHCWSPTNPGMDLVPPMYQNTAYSHIAAGKNHVCAIKGPYYADHDSGTVDCWEIVTSRNRSLASKQSDLYYDQSTNSLELDKIASGEGFTCGAVRGGGLVCWGPASTSLGVSNVSENYGVLVSGRSSVCGISNVSGNLKCWGDAGSFVEPPVEVSLVSLSAGMNHFCGIRADNHAVECWGNFNSSVVPKGSGFMAIASSDFTTCGIREDDLLLDCWLINSSKPDFDTPLELSSPGLCRVSPCNEGEFAFNVSVLNEPDLTSLCIRKDLRICSPCGSNCSQGLFLSSLCIENADRVCTPCSLCQNSSCWDVCQLKTYAQLHQKRWSHLRRLLIIVGSTAFGVILISTCGCLLPCLFTNRKSQGSKKQSQSCMGKQEQENDMNAGLHSSPSTGSCPGLPQVFRLSELKDATNGLKEFNELGRGSYGFVYKAVLTDGRVVAVKRANAATIIHTNNRDFEMELEILCKTRHCNIVNLLGYCSEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKISMQAAKGLEYLHKELTPPIVHRDVKSSNILLDSEWSARIADFGLLTSNDKDLNGDLKTDVYNLGIVLLEILSGRKAHDREFTPPNIVEWAVPLIKQGKAAAIIDRYVALPRNVEPLLKLADIAEQAVRENPSQRPSISDLASWLEQIVKDGLIL 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02583 771 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Bva04g02583 771 ProSiteProfiles Protein kinase domain profile. 515 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02583 771 Gene3D - 176 336 IPR009091 -
Bva04g02583 771 Pfam Protein tyrosine and serine/threonine kinase 518 665 IPR001245 GO:0004672|GO:0006468
Bva04g02583 771 SUPERFAMILY RCC1/BLIP-II 36 287 IPR009091 -
Bva04g02583 771 Gene3D Transferase(Phosphotransferase) domain 1 670 768 - -
Bva04g02583 771 Gene3D Transferase(Phosphotransferase) domain 1 593 669 - -
Bva04g02583 771 SMART serkin_6 515 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02583 771 PANTHER OS01G0750732 PROTEIN 33 769 - -
Bva04g02583 771 Gene3D Phosphorylase Kinase; domain 1 475 592 - -
Bva04g02583 771 SUPERFAMILY Protein kinase-like (PK-like) 490 762 IPR011009 -
Bva04g02583 771 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 344 399 IPR001368 GO:0005515
Bva04g02583 771 Gene3D - 31 171 IPR009091 -
Bva04g02583 771 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Bva04g02583 771 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 33 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02583 Bva-Chr4 23085395 23088450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02583 14 763 Receptor kinase-like Gene Family AT3G59420 31.481 1.83e-115 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Bva04g02583 PK_Tyr_Ser-Thr 7.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02583 - - qsu:112022775 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02583 04 23085395 23088450 Bva04g02583 04 23085395 23088450 ECH