Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02561 atggaaaatggaaaatggtaTGCTACGACGAAGTTGAAaggtagaagaaagaaacggTCGGAGCTTTTTGATGATGACAATACGAATCTTCCGCCACCCATATCTCTCGGCCATTTCTTCTTCACAATACCTGGAGACCCACTTCAAAATTTCCACAATCACAACCCTTTTGaccgaaagaagaaagaacgaAGTTGGAAAAAGGGAAGACCTTTCACTTTGTCATCGTCCAATTCTAACGACCCACCACCGCCTAAACCTTCTACTTTCACCTCCTTCCGGGACAAAGATTGGAATGAAGCATTTAATTTTACGGGAAATTTGGATTTCTTGGCTAATTGTATTAAGAAGAACGGAGATCTCACTGGTCGATTGTGTACAACAGCTGAACTAAAATTCTACTTCGCTAGTTTCTTTGATCATGGGGGATCAGCTACCAGTTACTTAAAACCTAATAAAAACTGCAATTTGACCTCATGGGTTTCTGGTTGTGAACCTGGTTGGGGTTGTAGTGTAGGAGAGAAAATTGACCTCAAAACAACGGAGGCTCCTCTTAGAATCAAGGACTGTCAACCTTGTTGCGAGGGGTTTTTCTGCCCTCAGGGAATGACTTGCATGATACCTTGTCCACTAGGTTCTTACTGTCCACTTGCGAAACTGAACCAAACAACTGGAATGTGTGACCCATATAGCTACCAGATACCTCCTGGAGAAACAGATCATAGTTGTGGTAGTGCTGATAGGTGGACTGGTGTTAACAATAACAGTGATATCTTCTGTTCTCCAGGGTCATACTGCCCAACTACAATAAGCAAAGTTTCTTGCAGTAGTGGACATTACTGCATGACGGGCAGCACAAATCAAATTCCATGCTTCAGGTTGAGTACCTGTAGTCCAAACTCATCAAGGCAAAATATGCAAGCTTACGGGCTTTTGCTTATTATTGGATTGAGTACTCTCCTGCTGATCATTTATAATTGTTCTGATCAAGTTCTCTCCACTCGAGAAAGAAGGCAGGCTAAATCCAGGGAAGCTGCAGCCAGACATGCAAGAGAAACTTTACAAGCTCGTGAAAGGTGGAAAATAGCAAAAGATGTTGCTAAGAAGGGTCTTCAAAATCAGCTCAGCCGTACGTTTTCTCGTAGAAAATCTGTAAAGCAAGCTGAGCCATCAAGAGGTGATTTTATGTTGCCATCCATGGCTCCGGATTCTTCAAGCGTGTCTGAACAGTCATCTTCagcttcaaaagaaaagaaaaaggaccCTAGTAACCTCACTAAAATGATGAATTCTATTGAGAATGACCCACATAGCGCTGAAGGATTCAATCTGCAGATTGGagataaaaacattaaaaagcaGATGCCAAAGGGAAAACAGTTACATACTCGTagccaaattttcaaatacgCGTATGGTCaaattgagaaagagaaagctaTGCAAGACACAAACAAGGACTTAACTTTCTCTGGAGTAATTTCAATGGCTACTGCTGGTGAGATTAGGACAAGGCCTGTGATTGAAGTAGCTTTCAAGGATCTAACTCTCACTTTGAAAGGGAAAAACAAACATATAATGAGGTGTGTGACTGGCAAACTCATGCCTGGTCGAGTTTCAGCTGTCATGGGTCCCTCGGGAGCTGGAAAAACGACATTTCTTTCTGCTTTGTTAGGAAAAACAAGAGGATGCAATGTGACAGGATCAATTCTGATAAATGGAAAACCTGAATTGATACACtcgtataaaaaaattgttggttTTGTACCACAAGATGATATTGTGCATGGGGACTTGACGGTGGAGGAAAATCTTCGTTTTAGTGCAAGATGCAGACTGTCTGCGGACATGCCAAAACCAGATAAGGTTCTGATTATTGAAAGAGTAATCGAGTCCTTGGGACTCCAGCCGGTGAGGGATTCGCTAGTTGGGACAGTAGAGAGGCGAGGCATATCTGGGGGGCAAAAAAAACGTGTAAATGTAGGATTAGAGATGGTGATGGAACCTTCATTGTTGATCTTAGATGAGCCTACAACTGGTCTAGACAGTGCATCTTCCAGTTTACTGCTCAAAGCACTTCGACGTGAAGCTCTTGAAGGGGTAAACATCTGCATGGTACTTCACCAACCAAGCTATACTTTGTTCAGAATGTTCGATGATATAATCTTTCTAGCTAAAGGTGGCCTTGTTGCTTATCTTGGACCTGTCAAAAAAGTAGAAGAATACTTTGCTGGAATAGGAATCGATGTACCAGACCGTGTAAACCCTCCAGACCACTTCATTGACATTCTGGAGGGTTTAGTGAAACCAAGTTCTCCAGGGGTGACACATGAGCAACTTCCCGTCAGATGGATGCTTCATAATGGCTACGCAATACCAGCAGATATGCTTCATTATGCTGATGAAATTGCTGCATCTTCAGTTGCTTCTACTTCAACTGAGGTAAAAGAGGCTACCCACGAAGCTGATGACCAATCCTTCGCTGGAGAGTTGTGGCAAGATCTGAAGAGTAATGTCCAGATGCATCGAGATCGTTTAGAGGCAACCTTCTTGAGGTCTAACGACTTATCCAACAGAAGAACTCCTGGTGTACTCCGCCAATTCAGATACTTCCTTGGGAGGGTTGTTAAGCAGCGTTTACGAGAAGCAAGAATACAAGCAGTTGACTATCTGATTTTATTACTTGCTGGTGCTATCCTTGGAACTCTTACCAAAATGAATGATGAAACATTTGGGTCCCTTGGCTATACTTATGCTGTCATTGCTGTCTCTCTACTATGCAAGATATCAGCTCTGAGATCATTTTCTCTGGATAAATTACAATACTGGAGAGAAAGTTCATCTGGGATCAGCACTCTGGCTCATTTTCTGTCCAAAGATACAGTAGATCATTTCAGTACAATCATCAAAACTGTGGTTTTTTTGtccatgttctatttttttagcaATCCAAGGTCAAGCTTCGGAAGTAATTACGTAATTTTGCTTTGCCTCGTGTACTGTGTGACTGGCATGGCTTATGTGCTTGCCATTTACTTTGAACCTGCTCCTGCGCAGCTGTGGTCAGTGCTCGTTCCCGTCGTTATGACTCTCATTTCAAACCAGGAAAGAGATACTGCTCTCGTGAGGACAATACAAAAACTGTGCTACCCAAAATGGGCTTTAGAGGCCTTTGTCATTGCAAATGCTGAAAGGCATTCTGGGGTATGGCTGTTAACTCGGTGTGGTTCACTGATGAACAGTGGCTATGACCTCCACGAGTGGTCTCTTTGTCTTGTTATCCTCGTTTTGTATGGTATAGTTGCCCGTGCTATAGCCTACCTTTGTATGTTGATCTCTCAAAAGAAGTG 3350 0.4069 MENGKWYATTKLKGRRKKRSELFDDDNTNLPPPISLGHFFFTIPGDPLQNFHNHNPFDRKKKERSWKKGRPFTLSSSNSNDPPPPKPSTFTSFRDKDWNEAFNFTGNLDFLANCIKKNGDLTGRLCTTAELKFYFASFFDHGGSATSYLKPNKNCNLTSWVSGCEPGWGCSVGEKIDLKTTEAPLRIKDCQPCCEGFFCPQGMTCMIPCPLGSYCPLAKLNQTTGMCDPYSYQIPPGETDHSCGSADRWTGVNNNSDIFCSPGSYCPTTISKVSCSSGHYCMTGSTNQIPCFRLSTCSPNSSRQNMQAYGLLLIIGLSTLLLIIYNCSDQVLSTRERRQAKSREAAARHARETLQARERWKIAKDVAKKGLQNQLSRTFSRRKSVKQAEPSRGDFMLPSMAPDSSSVSEQSSSASKEKKKDPSNLTKMMNSIENDPHSAEGFNLQIGDKNIKKQMPKGKQLHTRSQIFKYAYGQIEKEKAMQDTNKDLTFSGVISMATAGEIRTRPVIEVAFKDLTLTLKGKNKHIMRCVTGKLMPGRVSAVMGPSGAGKTTFLSALLGKTRGCNVTGSILINGKPELIHSYKKIVGFVPQDDIVHGDLTVEENLRFSARCRLSADMPKPDKVLIIERVIESLGLQPVRDSLVGTVERRGISGGQKKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLVAYLGPVKKVEEYFAGIGIDVPDRVNPPDHFIDILEGLVKPSSPGVTHEQLPVRWMLHNGYAIPADMLHYADEIAASSVASTSTEVKEATHEADDQSFAGELWQDLKSNVQMHRDRLEATFLRSNDLSNRRTPGVLRQFRYFLGRVVKQRLREARIQAVDYLILLLAGAILGTLTKMNDETFGSLGYTYAVIAVSLLCKISALRSFSLDKLQYWRESSSGISTLAHFLSKDTVDHFSTIIKTVVFLSMFYFFSNPRSSFGSNYVILLCLVYCVTGMAYVLAIYFEPAPAQLWSVLVPVVMTLISNQERDTALVRTIQKLCYPKWALEAFVIANAERHSGVWLLTRCGSLMNSGYDLHEWSLCLVILVLYGIVARAIAYLCMLISQKK 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02561 1116 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 78 1112 - -
Bva04g02561 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 511 735 IPR027417 -
Bva04g02561 1116 MobiDBLite consensus disorder prediction 51 91 - -
Bva04g02561 1116 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 510 751 IPR003439 GO:0005524
Bva04g02561 1116 Pfam ABC-2 type transporter 708 1116 IPR043926 GO:0140359
Bva04g02561 1116 Gene3D - 502 745 IPR027417 -
Bva04g02561 1116 MobiDBLite consensus disorder prediction 373 440 - -
Bva04g02561 1116 Pfam ABC transporter 530 678 IPR003439 GO:0005524
Bva04g02561 1116 SMART AAA_5 536 728 IPR003593 -
Bva04g02561 1116 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 78 1112 - -
Bva04g02561 1116 CDD ABCG_EPDR 508 734 - -
Bva04g02561 1116 ProSitePatterns ABC transporters family signature. 651 665 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02561 Bva-Chr4 22969150 22976123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02561 537 729 Calmodulin-binding Proteins AT2G36910 29.353 1.00e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02561 - - gmx:100780238 1601.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02561 04 22969150 22976123 Bva03g01151 03 11125339 11135057 ECH
Bva04g02561 04 22969150 22976123 Bva09g00274 09 1426632 1432502 ECH
Bva04g02561 04 22969150 22976123 Bva04g02561 04 22969150 22976123 ECH