Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02558 ATGAGTTCAGAAGTAGTCCTCCAACGATTTCCTCAACCAGATTCAAAACCTAACACAGTGGCACCCACGACCACCGAGTCCAACCCTAATGTACAACTCGCCCAAGTTCGCAAGCCCACCACACTATCTTCTCGTTCCAGCAAAGACCGCCATACTAAGGTAAACGGACGGGGCCGCCGTGTCCGCATGCCGCCGCTATGCGCCGCTCGAATTTTCCAGCTGACGCGCGAACTTGGCCACCGGTCCGACGGTGAGACCATAGAGTGGCTGCTACGTCAGGCTGAGCCCTCTATTATCGCTGCCACCGGAACCGGAACAGTCCCGGCTGACCCAGTATCCACCTCCTCCGCCGCCATCTCCTCCTCAGCAGCCTCTGTTCCTTGCCGGGTTCAACCCGCTTCAACTGTTAGCAGTGGGCAAGGGATGTTCGCAATGGCTCTCCCGCAGCCGTCGCCGAGTTGTCGTTTAGACTTGTGTCAGCCGGTTGGTATGGATTACGCCGCAGCGGCGGCAAATGGGTACCGGCATATGCCATCATTCACCGCCTTGTTGTTGCAGCCAGCGACGACGGAGGAAGCGGAAGATACCCAGCATGAGGAGAGTCTGAGGGAGCAATA 617 0.5786 MSSEVVLQRFPQPDSKPNTVAPTTTESNPNVQLAQVRKPTTLSSRSSKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPADPVSTSSAAISSSAASVPCRVQPASTVSSGQGMFAMALPQPSPSCRLDLCQPVGMDYAAAAANGYRHMPSFTALLLQPATTEEAEDTQHEESLREQ 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02558 205 Pfam TCP family transcription factor 46 134 IPR017887 -
Bva04g02558 205 MobiDBLite consensus disorder prediction 1 59 - -
Bva04g02558 205 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 28 134 - -
Bva04g02558 205 MobiDBLite consensus disorder prediction 1 42 - -
Bva04g02558 205 ProSiteProfiles TCP domain profile. 47 101 IPR017887 -
Bva04g02558 205 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 134 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02558 Bva-Chr4 22957987 22959015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02558 47 190 TCP Transcription Factor Family AT2G37000 56.250 3.62e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva04g02558 TCP 9.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02558 - - cam:101510590 261.536