Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02550 ATGTTTGCACCCAGATTAAGACGTTCACTCAGCTACTTGAATGAAGATCAACTTGTAGCGGCCATAGCAGGGGTACCAGATGATGTTAGGGAAGGGCATTTTGCTGTTCTTGCAATAAAGGGCGAGGAAACCAAAAGGTTTGTTATTGAATTAGATTACTTGAATGACCCTGCATTCTTGGGATTGCTGGACCTGGCTAAGGAAGAGTACGGCTTCAGAAACAAGGGAGCTCTTGCTGTCCCTTGCCGGCCTCAAGAATTACAGAAGATTCTGGACGATCGCAAGGTATATTA 293 0.4505 MFAPRLRRSLSYLNEDQLVAAIAGVPDDVREGHFAVLAIKGEETKRFVIELDYLNDPAFLGLLDLAKEEYGFRNKGALAVPCRPQELQKILDDRKVY 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02550 97 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 2 95 - -
Bva04g02550 97 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 95 IPR003676 GO:0009733
Bva04g02550 97 Pfam Auxin responsive protein 23 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02550 Bva-Chr4 22921128 22921421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02550 5 82 Calmodulin-binding Proteins AT4G34750 40.506 5.22e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02550 - K14488 gmx:100818734 127.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02550 04 22921128 22921421 Bva13g01985 13 15930247 15930585 BWGD
Bva04g02550 04 22921128 22921421 Bva04g02550 04 22921128 22921421 ECH