Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02542 ATGGGGGGAAAATGTCCGCACAGAAGcgtaaagaaaagaagatattcTCACAAAACTGCTCGTCGTACCAAATTCCTGTACAAAGGGGATGACATGGTTTATGATGAGCTTCAGAAGCCAGATGAAGAGAGGAAGCTCTTGCCCGTAGATGAAGATTTGCCAGGGATGGGCCAGTATTACTGTCGACACTGCGATCGATACTTTTCCAATGTGGCAGTGAGAGATGAACATTTTAAGACAAAACGACACAAGAAGCGCGTAAAGCAAATGATGGGGCCTGCACCACATACTCAACTCGATGCTGAAATAGCTGCGGGAATGGGTATGCCGGATAACGGTCCAAAGCTAATGTCTATGTA 359 0.4401 MGGKCPHRSVKKRRYSHKTARRTKFLYKGDDMVYDELQKPDEERKLLPVDEDLPGMGQYYCRHCDRYFSNVAVRDEHFKTKRHKKRVKQMMGPAPHTQLDAEIAAGMGMPDNGPKLMSM 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02542 119 Gene3D Classic Zinc Finger 47 109 - -
Bva04g02542 119 ProSitePatterns Zinc finger C2H2 type domain signature. 61 83 IPR013087 -
Bva04g02542 119 Pfam Zinc-finger double-stranded RNA-binding 58 84 IPR022755 -
Bva04g02542 119 ProSiteProfiles Zinc finger matrin-type profile. 59 89 IPR000690 GO:0003676|GO:0005634|GO:0008270
Bva04g02542 119 PANTHER EXPRESSED PROTEIN 1 119 - -
Bva04g02542 119 SUPERFAMILY beta-beta-alpha zinc fingers 48 110 IPR036236 -
Bva04g02542 119 SMART ZnF_U1_5 56 90 IPR003604 GO:0003676|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02542 3 118 C2H2 Transcription Factor Family AT2G36930 75.862 1.65e-62 187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02542 04 22881010 22882861 Bva04g02542 04 22881010 22882861 ECH