Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02508 ATGGCTGAATTTGAAGAACCCGTGAAGCAAGAGTTGGATTCAATAATTGTTTCCGAGGTTCAGTCTTATAATCCATGTGACTCATTCGTTCCAATTCATGCCTCAGAAACTGAATTTTCCTGGAATTCCCAGACGACAACTTCTGTGCAGGCTTCTGAGAGTACCAGCAACAGGGTACGTAAAGGTTTTTTAGTGAATGGTTACATTGTTTATACTCGAGAAAAGAAGTCTCGCCCAGCGAGTAATGCGTTTTCTGAGAATGAGAAAGTTAAGAGAACCAAGACCTCGGTCTCGCAGGAGCTTGAGACAAATACTGATATTCCGGTTGCAAGTGGTGGAGGTGGTGCAGATATAGATAACTtcgaaaaaaaattagaaattgaaGTCGAAAGCAATGAGGAAAaccttaattatattaaactaaAGAGCGAACCTGTACAGGCCTTGGCTGAGGAAGTTGGCTCCGAGGAGGTTAATATAGTGAATTCTAACAACAGTAAGAAGCATAAAGATCTTGTGTATAAGAAATTGAGGCGGTATAAGAGATCAAAGTTGAAACGAGAGGTTGACTCAAGTGATAAGACGGGAACAGTGTTAGAAGCTGCAGACACAGCAAATGCCGCTGTAAAAGCATTAACAAGTCCAAGAAACAAGCTTGAATTGAAGATGTCGAAGAAGATTGTAATCAACAAGAAACCCATGAACGTCAAAGAGCTCTTTGACACTGGCTTACTCGATGGGGTTACAGTAGTTTACGAGGGTGGCAAGAAGGCTTCTGGTCTGCGGGGTGTCATTCAGGATGGGGGGATATTGTGCTCATGCTGTGAGTGCAATGGACGCAATGTTATTCCTATTTCCCAATTTGAGATTCATGCTTGCAACGCATATAGGCGAGCAGCACAGTATATTTGCTTCGAAAACGGGAAGAGCCTTCTTGAGGTAATGAGAGCATGCAGGGGAGGTCCCCTTCATGCGGTGGAGGCCACAATTCAAAATATGCTTAATTCTCCGCctgaagaaaaatactttactTGTAGAAAATGCAAAGGATGTTTCCCTGCTTCATGCGTGGGAGGAGTAGGGCCCATATGCAATTCTTGCATAGAAACTAAGAAATCTGAAGTCAATTCTATAGATGCAATTGGCGATACAGTCGGCAAAAGAGTCAGGTCCCCTCGACCAGTACCCTTCCCCAAGCCTTCAAGTAGTCCTGAGCTGTGTACCACTTCAAAAATCAAGCGTCActggaagaaaaaaacaaaGCCTCCAAAACAGCTTAGCAGTTCTAAGTCTTCCAAGAGTGCTTCAGTGCCTATCCTCTCACAAAAGAAGAGTCTCTGGagtataaaaaagaaGTCATTAAAGGTGTCAGTAAAATTGAAGACACCGAGAATTACTTCAAATTCAAAGTGTTTATCTTCAGAAAATAAGAGTCAATGGAGGATCACTAAAAAGGACCAGCGGTTGCATAAGTTGGTTTTTGAGGAAGGTGGATTGCCTGATGGAACTGAAGTAGCTTATTATGCACGTGGACAGAAACTGCTTGAGGGCTACAAAAAAGGCTTTGCAATATTTTGTCGATGTTGCAACTCTGAGGTCAGCCCCTCACAGTTTGAGGTCCATGCTGGCTGGTCTTCTCGTAAGAAACCTTATGCATACATTTACACGTCAAATGGGGTGTCACTCCACGAGTTAGCAATATCTCTGTCTAAAGGTCGCAAATACTCTGCAAAGGATAATGATGATCTGTGCATTATTTGTTGGGATGGTGGAAATCTATTGCTTTGTGATGGCTGCCCAAGGGCATTCCATAAAGAATGTGCATCTCTGTCGAGCGTTCCACATGGTGACTGGTACTGTGAATTTTGCCAAAACATGTTCCAGAGAGAAAAGTTTGTGGAACATAATGCAAATGCTGTGGCAGCTGGAAGGATTGAAGGAGTTGATCCGATTAAAGAAATAACCCAGAGATGTATTCGCATTGTTAGAGACGTGGAAGCTGAGCTCAGTGGTTGTGCCTTATGCCGGGCTTATGACTTCAGCAGATCAGGGTTTGGCCCGCGCACAATAATACTCTGCGATCAGtGTGAAAAGGAATATCATGTTGGCTGTTTGAGGGATCACAAAATGGCATACTTGAAGGAGTTGCCAGAAGGGAATTGGTATTGTTGTCCGGATTGCACGAGAATACACTCCACTTTGCAAAACCTTCTAGTTAGGGGGGCTGAGAAGCTCTCTGACTCTCTCTTGGATGTTTTAAAGAAGAAGCAGGCGGAAAAAGGTTTAGAATCCCTTGGTGATATTGATGTAAAGTGGAGAGTTCTTAATGGCAAAATTGCTTCTCCTGAAACTAGGCCTTTACTTTCAGCTGCCGTCTCTAtctttcatGAATGCTTTGATCCCATAGTCGATGCAACCAGTGGACGTGACCTTATTCCAGCCATGGTTTATGGAAAGAATGTGAGGGGTCAAGAGTTTGGAGGAATGTATTGTGCAATCTTAATGGTCAATTCCTCTGTGGTATCTGCTGGAATGTTCCGAATTTTTGGCAGGGATGTTGCAGAACTCCCATTAGTTGCAACGAGTAATAGTAACCATGGAAAGGGCTATttccaaatattatttaactgCATCGAGAGACTGCTAGCTTTCTTGAAAGTGAAGAACCTTGTGCTACCAGCTGCTGAAGAAGCAGTATCCATATGGACAGATAAATTTGGGTTCAACCAGATAAAACCGGAGCTGCTTGTTGAGTACAGAAAGAACTGCCATCAAATGGTGACATTCAAAGGAACATCAATGCTTGAGAAAATGGTTCCTCCATGTCGAGTTATTAAATCCATTAAAGAGGAAAACCCCTA 2861 0.4173 MAEFEEPVKQELDSIIVSEVQSYNPCDSFVPIHASETEFSWNSQTTTSVQASESTSNRVRKGFLVNGYIVYTREKKSRPASNAFSENEKVKRTKTSVSQELETNTDIPVASGGGGADIDNFEKKLEIEVESNEENLNYIKLKSEPVQALAEEVGSEEVNIVNSNNSKKHKDLVYKKLRRYKRSKLKREVDSSDKTGTVLEAADTANAAVKALTSPRNKLELKMSKKIVINKKPMNVKELFDTGLLDGVTVVYEGGKKASGLRGVIQDGGILCSCCECNGRNVIPISQFEIHACNAYRRAAQYICFENGKSLLEVMRACRGGPLHAVEATIQNMLNSPPEEKYFTCRKCKGCFPASCVGGVGPICNSCIETKKSEVNSIDAIGDTVGKRVRSPRPVPFPKPSSSPELCTTSKIKRHWKKKTKPPKQLSSSKSSKSASVPILSQKKSLWSIKKKSLKVSVKLKTPRITSNSKCLSSENKSQWRITKKDQRLHKLVFEEGGLPDGTEVAYYARGQKLLEGYKKGFAIFCRCCNSEVSPSQFEVHAGWSSRKKPYAYIYTSNGVSLHELAISLSKGRKYSAKDNDDLCIICWDGGNLLLCDGCPRAFHKECASLSSVPHGDWYCEFCQNMFQREKFVEHNANAVAAGRIEGVDPIKEITQRCIRIVRDVEAELSGCALCRAYDFSRSGFGPRTIILCDQCEKEYHVGCLRDHKMAYLKELPEGNWYCCPDCTRIHSTLQNLLVRGAEKLSDSLLDVLKKKQAEKGLESLGDIDVKWRVLNGKIASPETRPLLSAAVSIFHECFDPIVDATSGRDLIPAMVYGKNVRGQEFGGMYCAILMVNSSVVSAGMFRIFGRDVAELPLVATSNSNHGKGYFQILFNCIERLLAFLKVKNLVLPAAEEAVSIWTDKFGFNQIKPELLVEYRKNCHQMVTFKGTSMLEKMVPPCRVIKSIKEENP 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02508 953 MobiDBLite consensus disorder prediction 80 96 - -
Bva04g02508 953 SUPERFAMILY FYVE/PHD zinc finger 571 625 IPR011011 -
Bva04g02508 953 Pfam PHD-finger 584 625 IPR019787 -
Bva04g02508 953 ProSitePatterns Zinc finger PHD-type signature. 584 623 IPR019786 -
Bva04g02508 953 ProSiteProfiles Zinc finger PHD-type profile. 669 730 IPR019787 -
Bva04g02508 953 SUPERFAMILY FYVE/PHD zinc finger 663 732 IPR011011 -
Bva04g02508 953 ProSiteProfiles Zinc finger PHD-type profile. 581 626 IPR019787 -
Bva04g02508 953 MobiDBLite consensus disorder prediction 80 99 - -
Bva04g02508 953 MobiDBLite consensus disorder prediction 387 437 - -
Bva04g02508 953 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 827 913 IPR016181 -
Bva04g02508 953 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 570 658 IPR013083 -
Bva04g02508 953 SMART PHD_3 671 728 IPR001965 -
Bva04g02508 953 SMART PHD_3 583 624 IPR001965 -
Bva04g02508 953 Pfam Tify domain binding domain 263 318 IPR032308 -
Bva04g02508 953 Pfam Tify domain binding domain 517 567 IPR032308 -
Bva04g02508 953 PANTHER AUTOIMMUNE REGULATOR 40 945 - -
Bva04g02508 953 Gene3D - 770 939 - -
Bva04g02508 953 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 668 730 IPR013083 -
Bva04g02508 953 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 40 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02508 Bva-Chr4 22698771 22706340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02508 65 945 PHD Transcription Factor Family AT2G36720 47.402 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02508 - - gmx:100802562 1159.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02508 04 22698771 22706340 Bva13g02038 13 16235840 16243551 BWGD
Bva13g03172 13 22209077 22213677 Bva04g02508 04 22698771 22706340 BWGD