Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02504 ATGGACACAATGTTGGCACCGCCATGGCTGGAGCCGCTTCTGAGCACACAGTTTTTCAGCGTGTGCCGGATTCACGGAGACGCAGCCAGAAGCGAGTGTAACATGTATTGCTTGGACTGCAATGGCGACGCATTTTGCTTTTATTGTCGTTCGTCGAGGCACAAGGATCATCGAGTCATTCAGataAGACGATCTTCGTATCATGATGTGGTGAGAGTTGCAGAAATTCAGAAGGTGCTGGATATAAGTGGAGTGCAGACATATGTAATAAATAGTGCTAGAGTTCTGTTTCTGAACGAAAGGCCTCAGCCAAAATCTGGGAAAGGAGTTGCTCACGTTTGTGAGATTTGCGGGAGAAGCCTTTTGGACCCATTTAGGTTCTGCTCTTTGGGTTGTAAGCTTGtggaaataaagagaaatggGGAAGCAAGCTTTACTTTAGATGGTAAGAATGACAAGACAATGGCTAGGAGATCAGTATCATCGAGACAGGAAGGAGAATTGCGTGAAGGCTCGCAACAAGACATGTATCCGGCCACGCCTCCTCCGCCTACGTCAAATGcaaggagaagaaaaggaattcCTCATAGGGCTCCTTTTGGCTCGTA 608 0.4457 MDTMLAPPWLEPLLSTQFFSVCRIHGDAARSECNMYCLDCNGDAFCFYCRSSRHKDHRVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHVCEICGRSLLDPFRFCSLGCKLVEIKRNGEASFTLDGKNDKTMARRSVSSRQEGELREGSQQDMYPATPPPPTSNARRRKGIPHRAPFGS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02504 202 MobiDBLite consensus disorder prediction 145 202 - -
Bva04g02504 202 MobiDBLite consensus disorder prediction 145 170 - -
Bva04g02504 202 Gene3D Classic Zinc Finger 20 65 - -
Bva04g02504 202 Pfam PLATZ transcription factor 63 134 IPR006734 -
Bva04g02504 202 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 201 - -
Bva04g02504 202 SUPERFAMILY B-box zinc-binding domain 20 64 - -
Bva04g02504 202 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02504 Bva-Chr4 22674365 22676228 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Bva04g02504 PLATZ 9.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02504 - - gmx:100809455 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02504 04 22674365 22676228 Bva13g02044 13 16273790 16275316 BWGD