Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02491 atGGTTCTGAAGACAGAGCTTTGTCGTTTCAGTGGGGCCAAGATCTACCCAGGGAAAGGAATCAGATTTGTTCGTGGAGATTCCCAGGTCTTCCTGTTTGCAAACTCAAAATGCAAAAGGTATTTCCACAACCGGTTGAAGCCATCCAAGCTCACCTGGACTGCCATGTATCGGAAGCAACACAAAAAGGACATTGCCCAAGAAGCTGTGAAGAAGAGGCGTCGTACTACAAAGAAACCTTACTCTAGGTCTATTGTTGGTGCTACTTTGGAAGTCATCCAGAAGAGAAGAACTGAGAAGCCAGAGGTTCGGGATGCAGCTAGGGAAGCTGCTCTTCGTGAAATTAAAGAGAGgatcaagaaaacaaaggatGAGAAGAAGGCGAAGAAGGCAGAAGTTGCCAAGTCACAAAAGACACAAGGCAAAGGCGGTGTTGCCAAGGGTGCTGGACCTAAAGGTCATAAACTTGGTGGTGGAGGCGGGAAACGCTG 491 0.4623 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVAKSQKTQGKGGVAKGAGPKGHKLGGGGGKR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02491 163 PANTHER 60S RIBOSOMAL PROTEIN L24 1 163 IPR000988 -
Bva04g02491 163 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Bva04g02491 163 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Bva04g02491 163 SMART 4TRASH 8 46 IPR011017 -
Bva04g02491 163 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Bva04g02491 163 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Bva04g02491 163 PANTHER LOW QUALITY PROTEIN: 60S RIBOSOMAL PROTEIN L24-LIKE 1 163 - -
Bva04g02491 163 Coils Coil 112 139 - -
Bva04g02491 163 MobiDBLite consensus disorder prediction 118 136 - -
Bva04g02491 163 Gene3D - 69 138 - -
Bva04g02491 163 MobiDBLite consensus disorder prediction 118 163 - -
Bva04g02491 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02491 Bva-Chr4 22617300 22619223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02491 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 83.439 6.56e-85 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02491 K02896 - rcu:8274878 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02491 04 22617300 22619223 Bva13g02063 13 16380695 16383038 BWGD
Bva04g02491 04 22617300 22619223 Bva04g02491 04 22617300 22619223 ECH