Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02487 ATGGAACCCAATGGACTCGGTGATGGTATGTTTTCTGGAATGAATCCTGGGTTGTTAGGAGTAGAAAGCACTTTACACCAACAGCAAAACGCCCCCAATCCTCAAAATCCTAACCATTTACATCAATCCCAAATGGTTTCTTATGCCCAGCATGACAATGATCACCACCCACAATCCCAGCCTTCAATCAAACTTGGGTACCCATATTCGGCCAAGACCAAGCAACTAACACCACTCAGTGATGAAGACGAGCCTGGGTTCGCTGCCGATGACAGCTCCGGGGACCCCAAAAGGAAAATGTCACCATGGCAAAGAATGAAGTGGACGGATACCATGGTTAGGCTCTTAATAGTGGCGGTTTACTACATTGGAGATGAGGCTGGTCCCGAAGGAACCGATCCCACagggaagaagaagaccaCGGGTTTGTTGCAGAAGAAAGGGAAATGGAAATCGGTGTCGAGGGCTATGCTGGAGAAGGGATTTTATGTGTCGCCTCAGCAATGCGAGGACAAATTCAATGATCTGAATAAAAGGTACAAAAGGGTGAATGATATTCTGGGCAAGGGAACAGCTTGCAAGGTCGTGGAGAATCAAAACTTACTGGAAACAATGGATTTATCACCGAAGATGAAAGAAGAAGTTCGAAAATTGCTGAATTCTAAGCATCTATTCTTCAGAGAAATGTGTGCCTACCATAGTAGTTGCAATCATGGAAACATTAGTGGTGCTCCCGCTGCGCATCAGTCCCGAGAGGCCGGAACAGATGCATCTCAGGTTCAACCAttacagcagcagcagcaacaaccACCACAGCATCAGCGATGTTCTCATTCATCGGAGAATGGGGTGGCGAACTTGGGCAGGCCAAGCCCAGAAGGAATGAAGATGTTTAAAGGAGGAAGCGTGGAAGATAATGAGGACGACGATGAGGAAGATGATTCCGATGACTATTCTGAAGAGGAAGGAGATGATTCTGCAGAAGGTGGTTCAAGGGGTCAAATTGGACATGGACTTGAGGACGATGATGACAACGATGGCCGGGCTTCGCGAAAAAGACCAAAGAAAGCAGCATTTCCGGTGTCTTCTCAGGTGATGCAGCAATTGAGCAGTGAGGTGACAAGCTTGTTCCAAGATGGGGGAAGGAATGCTTGGGAGAAAAAGCAATGGGTAAAGACGAGGCTAATGCAATTGGAGGAGCAGCAGATGAACTATCAGTATCAAGCATTTGAGTTGGAAAAGCAAAGGCTCAAATGGGTCAGGTTTAGCAGCAAGAAGGAGAGGGAGATGGAAAGATCTAAGCTTGAAAATCAACAGAGATGCCTTGAAAATGAGAGGATGGTCTTGATGATTCGCCAGAAGGAGCTTGAGTTGCTGAATCATCACCAtcaacaacagcagcagcaacattCTTCTAACTG 1421 0.4455 MEPNGLGDGMFSGMNPGLLGVESTLHQQQNAPNPQNPNHLHQSQMVSYAQHDNDHHPQSQPSIKLGYPYSAKTKQLTPLSDEDEPGFAADDSSGDPKRKMSPWQRMKWTDTMVRLLIVAVYYIGDEAGPEGTDPTGKKKTTGLLQKKGKWKSVSRAMLEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACKVVENQNLLETMDLSPKMKEEVRKLLNSKHLFFREMCAYHSSCNHGNISGAPAAHQSREAGTDASQVQPLQQQQQQPPQHQRCSHSSENGVANLGRPSPEGMKMFKGGSVEDNEDDDEEDDSDDYSEEEGDDSAEGGSRGQIGHGLEDDDDNDGRASRKRPKKAAFPVSSQVMQQLSSEVTSLFQDGGRNAWEKKQWVKTRLMQLEEQQMNYQYQAFELEKQRLKWVRFSSKKEREMERSKLENQQRCLENERMVLMIRQKELELLNHHHQQQQQQHSSN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02487 473 Coils Coil 425 445 - -
Bva04g02487 473 Coils Coil 395 415 - -
Bva04g02487 473 MobiDBLite consensus disorder prediction 252 286 - -
Bva04g02487 473 MobiDBLite consensus disorder prediction 304 324 - -
Bva04g02487 473 Gene3D - 108 182 - -
Bva04g02487 473 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 472 - -
Bva04g02487 473 MobiDBLite consensus disorder prediction 21 66 - -
Bva04g02487 473 MobiDBLite consensus disorder prediction 243 361 - -
Bva04g02487 473 MobiDBLite consensus disorder prediction 1 101 - -
Bva04g02487 473 Pfam Myb/SANT-like DNA-binding domain 105 231 IPR044822 -
Bva04g02487 473 PANTHER F16F4.11 PROTEIN-RELATED 1 472 - -
Bva04g02487 473 MobiDBLite consensus disorder prediction 335 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02487 Bva-Chr4 22602177 22603987 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva04g02487 Myb_DNA-bind_4 1.4e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02487 - - zju:107432054 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02487 04 22602177 22603987 Bva13g02066 13 16398702 16400672 BWGD
Bva04g02487 04 22602177 22603987 Bva04g02487 04 22602177 22603987 ECH