Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02485 ATGGCCTCCTGCGACGACGACGACGACTTCTCACTCCTCGACGACGATCATCCCCAATCAAACGCTGGTCCCCACGACCACATCCACCAACCCTACGCGCCGCACCATTTCTCAACCGCCGTAGCTTCTCTCCAACCGGAACAGGTTACCGCCGTAGAGCAGGTCGGCGACACCGGCGGTGACTACGTAAACTCCTTTGATAATGATGTCGAAGGGAACAAGAGAAAGGATCTGGAGGAGGTCGGCGAGGAAACGACTCCGTATGGGTACAAAAGATCCAAGCCTTCAGGCGGTGGAGAGTACAGGAAGGACAGAGAGGAGTGGAGCGACGCCGCGATCGTGTGCCTTCTGGAAGCTTACATGGAAAAGTTCACCCAGTTGAATCGAGGTAATCTGAGAGGGAGGGACTGGGAGGAGGTGGCGGCTGCAGTAAGTGAGCGATCCGAGAATCAATCGAAGAGTGTGGAGCAGTGCAAGAACAAGGTTGATAATTTGAAGAAGAGGTACAAATTGGAGAGACATAGGATGAGTAGTGGCTGCATTTCGACCAGCCATTGGCCTTGGTTTAAGCGGATGGAACAGATCGTTGGCAATTCCTTATCTTTGAAGATTGCGGCGGAAGAGAGTAAAGGGGTTGGTTCCGCTGGGAACTCACCGAGGCAATCAAAGAGATATGGAGCGGTAATGGCCAGCAGTGGAGGCCAAGCAAACAGCATGAAGTCCAAAGCAATGTCAAACTTTAGATGGCGTAGggtaattcttaaaattagtGGAGTGGCTCTTACTGGATCTGATAACTGCAATATTGACCCAAAGGTGGCCATGTTAGTTTCAAGAGAAGTTGCAATAGCTTCCCGCCTTGGTGTGGAGGTGGCAATGGTTGTTGGAGGTTGTAACTTCTTCTGTGGAGATGCATGGGTAACTTCAACAGGTTTAGAAAGATGTACTGCATACCAAGTTGGCATGATGGCAACTGTGATGAATTCtttattgctccaatcaacCTTGGAGAAGATGGGAATTCAGACTCGCGTACAAACTTCGATTGCTATACAGGAGTCTGCTGAACCATACAATAGGCAGCGCGCCATCAGACATCTTGAGAAAGGCAGGGTGGTTATTTTTGCTGGCATTGGTTTTGGCACTGGGAATCCACTCTTCTCGACTGACATAGCTGCAGCACTTCGAGCTTCAGAGATTAATGCTGAGGCAGTCCTCAAGGGTACTAATGTAGATGGTGTATATGACTGCAACTCCCGGGACAATAATTTCACTTTTGAGCACATATCCTTCAGGGAGCTGGTTTCAAGGGGCGCTGCCTCCATGGACATGTCAGCACTAACATTCTGTGAGGAAAATGGTATTCCTGTCGTGGTTTTCAATCTATTGGAGCCAGGGAACATCTCAAAAGCTTTGTGCGGAGAACAAGTTGGTACACTAATTGATCAAACCGGAGCATTAAGTTA 1466 0.4823 MASCDDDDDFSLLDDDHPQSNAGPHDHIHQPYAPHHFSTAVASLQPEQVTAVEQVGDTGGDYVNSFDNDVEGNKRKDLEEVGEETTPYGYKRSKPSGGGEYRKDREEWSDAAIVCLLEAYMEKFTQLNRGNLRGRDWEEVAAAVSERSENQSKSVEQCKNKVDNLKKRYKLERHRMSSGCISTSHWPWFKRMEQIVGNSLSLKIAAEESKGVGSAGNSPRQSKRYGAVMASSGGQANSMKSKAMSNFRWRRVILKISGVALTGSDNCNIDPKVAMLVSREVAIASRLGVEVAMVVGGCNFFCGDAWVTSTGLERCTAYQVGMMATVMNSLLLQSTLEKMGIQTRVQTSIAIQESAEPYNRQRAIRHLEKGRVVIFAGIGFGTGNPLFSTDIAAALRASEINAEAVLKGTNVDGVYDCNSRDNNFTFEHISFRELVSRGAASMDMSALTFCEENGIPVVVFNLLEPGNISKALCGEQVGTLIDQTGALS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02485 488 Hamap Uridylate kinase [pyrH]. 247 482 IPR015963 GO:0005737|GO:0006221|GO:0033862
Bva04g02485 488 SUPERFAMILY Carbamate kinase-like 248 481 IPR036393 -
Bva04g02485 488 Pfam Myb/SANT-like DNA-binding domain 105 195 IPR044822 -
Bva04g02485 488 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 67 487 IPR011817 GO:0006221|GO:0009041
Bva04g02485 488 Pfam Amino acid kinase family 251 461 IPR001048 -
Bva04g02485 488 CDD AAK_UMPK-PyrH-Ec 250 482 IPR015963 GO:0005737|GO:0006221|GO:0033862
Bva04g02485 488 MobiDBLite consensus disorder prediction 68 87 - -
Bva04g02485 488 Gene3D - 108 171 - -
Bva04g02485 488 PANTHER URIDYLATE KINASE 67 487 - -
Bva04g02485 488 Gene3D - 239 487 IPR036393 -
Bva04g02485 488 Coils Coil 148 175 - -
Bva04g02485 488 MobiDBLite consensus disorder prediction 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02485 Bva-Chr4 22588073 22592086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02485 94 205 Trihelix Transcription Factor Family AT3G14180 37.391 5.74e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva04g02485 AA_kinase 6.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02485 - - gmx:100805176 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02485 04 22588073 22592086 Bva04g02485 04 22588073 22592086 ECH