Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02484 ATGATGAATAAGTCTTATTCCACAAATGTGGCCTTAGCTTTggccttcttcttcctcacatTCACACTGTCTCTCTGTCTTCACCATCACCAGAATGACACCTACGCCCTCACCCAATTTCAGCTTCAAACAGACGCTCATGGCTACCTCAGCTCTAACTGGACAGGCCCTGATGCCTGCACCGCCACCTGGCTCGGCGTTCAATGCTCCCCCAATGGTAGAGTCACCGCACTCTCTCTCCCTTCCCTCAATCTCAGAGGTCCCATTGATTCTCTCTCATCACTTACCCATCTTCGCCTGCTTGACCTCCACGATAACCGTTTAAACGGCACCATTACGCCCCTCTCCAGCTGCACCAATCTCAATCTCCTTTATCTCTCTAGCAATGACTTCTCCGGCGAGATACCACCGGAGATATCGTCTCTCAAGTCTCTACTCAGGCTTGACCTCTCCGACAACAACATTGGTGGCCCAATTCCCAAGGAATTGTCTCAATTGGATCCGCTTCTCACGCTTCGGTTACAGAACAACGAGCTCTCTGGCCAAATTCCAGAtctttctgtttctcttgTGAACCTCGAACAGCTGAATATGACCAACAACGAGCTCTATGGACGCGTGCCTGATGTAATGTTGAAGAAATTCGGTGATATAAGCTTCTCGGGGAATGAAGGTCTATGTGGGTCGAAACCATTGCCGGTTTGTTCCTTTACCGAGAATCCATCTCCCTCAGCACCAACCGAGATAGTTCCTTCTAACCCGAGCTCGTTGCCACAAACAAGTATAATTGCTCAGCCCAAAGCCCAATCGCGGAAAGGGCTAAGTCCCGGAGTTATAGTAGCCATTGTAGTAGCTAATTGTGTGGCATTGTTAGTGGTAACCTCTTTCATTGTTGCCCACTGTTGCGCCAGAGAACGAAGCTCCGATTCCACGGTGGGTAGTGAAAGCGGAAAGAGGAAAAGCAGTAGTTATGGAAGTGAGAAGAAGGTGTATGCCAGTGGGGGTGGAGATAGTGACGGAACTGCTGACACGGATCGAAGCAAGCTTGTGTTTTTCGATAGGAAGAGTCAATTTGAGCTTGAAGATTTGCTGCGAGCATCGGCGGAGATGCTGGGGAAAGGAAACTTGGGGACAGTTTACAGGGCAGTGCTTGATGATGGATGCACCGTGGCTGTGAAGAGGCTCAAGGACGCAAACCCATGCGACAGAAAGGAGTTTGAGCAGTACATGGATGTCATTGGAAAACTGAAGCACCCAAACATTGTCAGACTCAGAGCCTTTTACTACGCCAAGGAAGAAAAGCTTCTTGTTTATGATTATCTCTCCAATGGAAGCTTGCATTCTCTTCTCCATGGGAACCGAGGTCCAGGGAGAATTCCATTGGATTGGACCACAAGAGTTAGCTTGGTGTTAGGGGCAGCCAGAGGACTTGCTCGGATTCATGCAGAATACAGTGCAGCAAAGATACCTCATGGGAACATCAAATCCTCCAACGTAATTCTTGACAAGAATGGTGTTGCATGCATCTCTGATTTCGGGCTGTCACTCTTATTGAACCCTGTCCACGCCATTGCAAGAATGGGAGGTTACAGAGCTCCTGAACAAGCAGAAGTCAAGAGGCTCTCTCAGCAAGCAGATGTCTATAGTTTTGGGGTCCTATTGCTGGAAGTTCTGACCGGGAGAATTCCCTCACAGTACCCTTCTCCAACTCGTCCTCGGGTTGAAGGAGAGGAATCACAAGCTGTGGATCTTCCAAAATGGGTGCGTTCTGTTGTGAAGGAAGAATGGACAGCAGAAGTGTTTGATCAAGAACTGTTGCGGTACAAGAACATTGAAGAAGAGATGGTTTCAATGCTGCATGTGGGATTGGCTTGTGCGGCGCCTCAGCCAGAGAAGAGGCCAACCATGGCTGAAGTTACCAAGATGATAGAGGATATCAGAGTAGAGCAATCTCCTCTCGGAGAGGATTATGATGAGTCACGCAACTCGCTTTCTCCTTCACTTGCCACCACTGAAGATGGGTTGGCATG 2030 0.4798 MMNKSYSTNVALALAFFFLTFTLSLCLHHHQNDTYALTQFQLQTDAHGYLSSNWTGPDACTATWLGVQCSPNGRVTALSLPSLNLRGPIDSLSSLTHLRLLDLHDNRLNGTITPLSSCTNLNLLYLSSNDFSGEIPPEISSLKSLLRLDLSDNNIGGPIPKELSQLDPLLTLRLQNNELSGQIPDLSVSLVNLEQLNMTNNELYGRVPDVMLKKFGDISFSGNEGLCGSKPLPVCSFTENPSPSAPTEIVPSNPSSLPQTSIIAQPKAQSRKGLSPGVIVAIVVANCVALLVVTSFIVAHCCARERSSDSTVGSESGKRKSSSYGSEKKVYASGGGDSDGTADTDRSKLVFFDRKSQFELEDLLRASAEMLGKGNLGTVYRAVLDDGCTVAVKRLKDANPCDRKEFEQYMDVIGKLKHPNIVRLRAFYYAKEEKLLVYDYLSNGSLHSLLHGNRGPGRIPLDWTTRVSLVLGAARGLARIHAEYSAAKIPHGNIKSSNVILDKNGVACISDFGLSLLLNPVHAIARMGGYRAPEQAEVKRLSQQADVYSFGVLLLEVLTGRIPSQYPSPTRPRVEGEESQAVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEEMVSMLHVGLACAAPQPEKRPTMAEVTKMIEDIRVEQSPLGEDYDESRNSLSPSLATTEDGLA 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02484 676 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 667 - -
Bva04g02484 676 Pfam Protein kinase domain 369 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02484 676 SUPERFAMILY L domain-like 31 212 - -
Bva04g02484 676 Gene3D Phosphorylase Kinase; domain 1 338 440 - -
Bva04g02484 676 CDD STKc_IRAK 371 646 - -
Bva04g02484 676 Gene3D Transferase(Phosphotransferase) domain 1 441 664 - -
Bva04g02484 676 PANTHER LRR RECEPTOR-LIKE KINASE 7 667 - -
Bva04g02484 676 MobiDBLite consensus disorder prediction 240 259 - -
Bva04g02484 676 Gene3D Ribonuclease Inhibitor 25 116 IPR032675 -
Bva04g02484 676 ProSiteProfiles Protein kinase domain profile. 365 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02484 676 MobiDBLite consensus disorder prediction 648 676 - -
Bva04g02484 676 Gene3D Ribonuclease Inhibitor 117 236 IPR032675 -
Bva04g02484 676 MobiDBLite consensus disorder prediction 308 341 - -
Bva04g02484 676 SUPERFAMILY Protein kinase-like (PK-like) 369 643 IPR011009 -
Bva04g02484 676 ProSiteProfiles Leucine-rich repeat profile. 97 119 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02484 Bva-Chr4 22584914 22587589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02484 31 672 Receptor kinase-like Gene Family AT2G36570 69.289 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva04g02484 Pkinase 7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02484 - - jre:109015904 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02484 04 22584914 22587589 Bva13g02069 13 16417750 16420374 BWGD
Bva04g02484 04 22584914 22587589 Bva04g02484 04 22584914 22587589 ECH