Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02483 ATGGCTTACATGTGGCGCAAGCTTGGCTGCAGCAGTGGCGGCGGGAAGAAACCACCAGCGGATGTTCCACCAGGTCACGTGGCCATTCTGGTGGGCGAAACAAAAAGGAGGCATGTAATAAAGGCAAACTACCTTAGCCATCCACTACTTCAACAACTACTAGACCAAGTATATGAAGAGTACGGTTTCAACAAGGATGGCCCTCTGGTTATTCCTTGTAATGAGCTTATTTTTGAGGATATAATTCAGACTCTTCGAGATAGAGATTCTACAAGTTCACTTCTATTCTCTTGCCAAGTGGCATCGAAGAAGCTAGAATTGAGCTTGTATAAGGACTCTGAACCACTACTACAAGGCTTTGATGACAAAAAAAGGAGCAGCTA 383 0.4465 MAYMWRKLGCSSGGGKKPPADVPPGHVAILVGETKRRHVIKANYLSHPLLQQLLDQVYEEYGFNKDGPLVIPCNELIFEDIIQTLRDRDSTSSLLFSCQVASKKLELSLYKDSEPLLQGFDDKKRSS 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02483 127 Pfam Auxin responsive protein 16 85 IPR003676 GO:0009733
Bva04g02483 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 115 IPR003676 GO:0009733
Bva04g02483 127 PANTHER AUXIN RESPONSIVE SAUR PROTEIN 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02483 Bva-Chr4 22580074 22581415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02483 1 93 Calmodulin-binding Proteins AT4G34750 47.312 6.36e-28 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02483 K14488 - gmx:100777611 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02483 04 22580074 22581415 Bva04g02483 04 22580074 22581415 ECH