Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02470 ATGGAAATGCCTGGTAGAAGATCCAACTACACGCTTTTGAGTCAAATTCCTGATGACCAGTTCGGTGGCGGAGTCTCCTTGTCGGGAACAACAGCTCCAACTTCTTCATCTGGGGACGGGAAGAACAATAAAAGCAAGCTGGATAGAGGCTTTGATTGGGACTTAACTGCTGATCATAGGGTCACTCAGCAGGGGAATCGGATCGGAAACTTATATTCATCGATCGGATTGCAGAGGCAGTCTAGTGGGAGCAGTTTTGGTGAAAGTTCGCTATCAGGGGAGTATTATGCTCCCACTCTGTCAGCAATAGCTGCGAATGAGATCGATGCCTTTGCGTATGATGATGGATTCAAGATTGGTGCAGGCGGTGTTGGTGGTGAGTTGAGAACCAAGTTGACGGAGACCACGTTGAGAACAGGAGGCTCGTCATCAGGTAAAAGCTGGGCGCAGCAGACGGAGGAGAGTTATCAATTACAGCTAGCTTTGGCACTTCGGTTTTCATCTGAGGCAACGTGTGCTGATGATCCCAATTTTCTGGATCCTGTTCCTGATGAATCCACTCTAAGATCGTCATCATCAAGTTCGGCAGAGGCAGTGTCACATCGATACTGGGTCAATGGCTGCCTATCATACTTCAACAAAATTCCTGATGGCTTTTACCTGATTTATGGGATGGATCCCTATGTTTGGACTGTATGCACTGATCTGCAGGAAAATGGTCGGATACCATCAATTGAGTCTCTAAAGTCTGTTGATCCTTGCACTGATTCTTCACTGGAAGTCATTTTAGTCGATCGACGTAGTGATCCCAGCTTAAAGGAACTGCAAAATAGAGTAGTTAATATCGCTAGTAGCTGTATAAGCACAACAGAAGTTGTAGACCAACTTGCCAAGCTGGTTTGCAACCGTATGGGGGGTGCAGCATCTGTTGGGGAAAATGACTTTGTTTCCATCTGGAGGGAGTGCAGTAATGATCTTAAAGATTGCTTAGGATCTGTTGTTGTTCCAATAGGTAGTCTATCTGTTGGCCTCTGCAGGCATCGTGCTATATTATTCAAAGTTCTAGCTGATACCATTGATTTACCATGCCGAATTGCCAAGGGCTGTAAGTACTGCTCAAGAGATGATGCTTCCTCTTGTCTTGTCCGATTTGGGCTTGACAGGGAATATCTGGTTGATTTAATTGGGAAGCCAGGTCATTTATGTGTGCCAGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCACGACTTAAACCAGCAGCTGAGCCTACCATTGATTTCAGGTCACTGGCCAAACAGTATTTCTCAGATTGTCTGTCTATTGAGCTTATCTTCGACAGTAATTCTGCAgAACTGTTTGATGGAAAGTACAAGGACAGAAATAACCTTAGGTCAATTCCAAACGACAGCAATAAGACTTCCCGCCTGCCTTTGCATCCGCAAGTTCTATATCCAAGCACACAAGATCAAGGTTCTGAAACATTTAAATCATGTAATCTTCCTCAAAACATCGTAGATTCAACAGCTATGGGCAAGGATATAATGCCTTTCAAGCTTAACCGACCTGTTGGGCATAAAGACATTCAGTCCTCTTTGGTGCTGACCAATTCAAATGTGGATGTGATTGAGGGTAGGAGGTTTACTGAAGGAAGCCAACTGGTTCCTAGCAAAACCAGTAGAGAGCTTGGCCTTGATGTGGAGGATTTTGACATACCTTGGAGTGATCTGGTTTTAAAAGAGAGAATCGGATCAGGTTCTTTTGGAACAGTACATCGTGCTGAGTGGAATGGCTCGGATGTTGctgtgaaaattttgatggaACAAGATTTTCATGCAGAACGCTTCAAAGAATTTCTGAGGGAGGTTGCAATAATGAAACGCATGCGGCATCCAAacattgttttgtttatgGGTGCAGTCACACAGCCTCCAAATTTATCTATTGTCACAGAATATTTATCAAGGGGTAGCTTATATAGGCTTTTGCATAAACCTGGCGCCAGAGAGATGTTGGATGAGAGGCGTAGATTGACTATGGCTTATGACGTGGCAAAGGGAATGAATTATCTTCATAAGCGTAACCCTCCCATTGTTCATAGAGATTTGAAGTCGCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTTGTGATTTTGGGCTTTCCCGTCTGAAGGCAAATACCTTTCTCTCGTCCAAGTCAGCTGCTGGCACTcCTGAATGGATGGCTCCAGAAGTTCTACGTGATGAGCCATCAAATGAGAAATCAGATGTTTACAGTTTTGGTATAATCTTGTGGGAGCTGGCAACATTGCAACAGCCGTGGGGTAATTTGAACCCAGCACAGGTTGTAGCAGCTGTTGGCTTTAAGGGCAAACGGCTTGAGATTCCACGGGACTTGAATCCCCTAGTAGCTGCGATAATTGAGTCTTGCTGGGCTAATGAGCCCTGGAAACGTCCTTCTTTCGCTAGTATCATGGATTCTTTGAGACCAAGTCTGAGAGTCACAGTTGTATATTTCTGTACTAATTCAGATTGGGAATACTG 2573 0.4388 MEMPGRRSNYTLLSQIPDDQFGGGVSLSGTTAPTSSSGDGKNNKSKLDRGFDWDLTADHRVTQQGNRIGNLYSSIGLQRQSSGSSFGESSLSGEYYAPTLSAIAANEIDAFAYDDGFKIGAGGVGGELRTKLTETTLRTGGSSSGKSWAQQTEESYQLQLALALRFSSEATCADDPNFLDPVPDESTLRSSSSSSAEAVSHRYWVNGCLSYFNKIPDGFYLIYGMDPYVWTVCTDLQENGRIPSIESLKSVDPCTDSSLEVILVDRRSDPSLKELQNRVVNIASSCISTTEVVDQLAKLVCNRMGGAASVGENDFVSIWRECSNDLKDCLGSVVVPIGSLSVGLCRHRAILFKVLADTIDLPCRIAKGCKYCSRDDASSCLVRFGLDREYLVDLIGKPGHLCVPDSLLNGPSSISFSSPLRFPRLKPAAEPTIDFRSLAKQYFSDCLSIELIFDSNSAELFDGKYKDRNNLRSIPNDSNKTSRLPLHPQVLYPSTQDQGSETFKSCNLPQNIVDSTAMGKDIMPFKLNRPVGHKDIQSSLVLTNSNVDVIEGRRFTEGSQLVPSKTSRELGLDVEDFDIPWSDLVLKERIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFLREVAIMKRMRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAREMLDERRRLTMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGIILWELATLQQPWGNLNPAQVVAAVGFKGKRLEIPRDLNPLVAAIIESCWANEPWKRPSFASIMDSLRPSLRVTVVYFCTNSDWEY 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02470 857 ProSitePatterns Protein kinases ATP-binding region signature. 590 611 IPR017441 GO:0005524
Bva04g02470 857 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 127 840 - -
Bva04g02470 857 CDD STKc_MAP3K-like 590 838 - -
Bva04g02470 857 Pfam Ethylene-responsive protein kinase Le-CTR1 196 402 - -
Bva04g02470 857 Gene3D Transferase(Phosphotransferase) domain 1 663 846 - -
Bva04g02470 857 SMART serkin_6 584 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02470 857 Pfam Protein tyrosine and serine/threonine kinase 585 838 IPR001245 GO:0004672|GO:0006468
Bva04g02470 857 PRINTS Tyrosine kinase catalytic domain signature 746 756 IPR001245 GO:0004672|GO:0006468
Bva04g02470 857 PRINTS Tyrosine kinase catalytic domain signature 765 787 IPR001245 GO:0004672|GO:0006468
Bva04g02470 857 PRINTS Tyrosine kinase catalytic domain signature 809 831 IPR001245 GO:0004672|GO:0006468
Bva04g02470 857 PRINTS Tyrosine kinase catalytic domain signature 658 671 IPR001245 GO:0004672|GO:0006468
Bva04g02470 857 PRINTS Tyrosine kinase catalytic domain signature 699 717 IPR001245 GO:0004672|GO:0006468
Bva04g02470 857 MobiDBLite consensus disorder prediction 24 41 - -
Bva04g02470 857 SUPERFAMILY Protein kinase-like (PK-like) 569 837 IPR011009 -
Bva04g02470 857 MobiDBLite consensus disorder prediction 23 46 - -
Bva04g02470 857 ProSiteProfiles Protein kinase domain profile. 584 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02470 857 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1 127 840 - -
Bva04g02470 857 Gene3D Phosphorylase Kinase; domain 1 577 662 - -
Bva04g02470 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02470 Bva-Chr4 22517517 22518137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02470 1 846 MAP Kinase Kinase Kinase AT5G03730 67.708 0.0 1038
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bva04g02470 PK_Tyr_Ser-Thr 4.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02470 K14510 - gmx:100800648 1281.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02470 04 22517517 22518137 Bva13g02083 13 16506671 16514249 BWGD
Bva04g02470 04 22517517 22518137 Bva04g02470 04 22517517 22518137 ECH