Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02469 ATGAACCCAAACGACCAAGATAACCCAAATTCCACGACAAGATATCCTGGTAAAGCACCGGCTGATTCTTCCTTGGGGAAGGGGACAGTTGGATTGTCCTCCACTAAGCTTGATCGGTCAGAATCTTTATCGGATCCTCGATCATTTGTTTTAGCTCCACAATTTGGAGATACCTCGGCTGGTCTTTCCATGGCAGACATTGGCCTTTCAGGgcctcttccttcttctcctttaATGGAGTTTGAAGCATCTTCAACTATAAACCCGTTGTCTTCCGCTGAATTAATTGCAACTAGCGTTGAGTTGGAGAACGCTTGTGTGCCTCAGCCGCTTGAGTCTTTACAGGGGAATCCAGTTCCACCATTTCTATCTAAAACTTTCGATCTTGTGGATGATCCATCGCTGGATCCGATTATATCTTGGAGCTTAACAGGTGGGAGTTTCGTGGTATGGGACCCTGTGGAGTTTGCAAGAATCATCTTGCCCCGGAATTTCAAGCATAACAATTTCTCCAGTTTTGTTCGCCAGCTAAACACTTATGTAGATGATGCAAAACTTTGctttatttgtgtttttcttGCATACTTAATCAGGACAGAGACTGCAATTGGAACTGGCCAGAGAAGGAATATTTCCCCTCCTGAGTGTCCACTGTGGTGGGGATTTCATCTTCCGCAGGGGTTCCGCAAGATTGATACTGATAAATGGGAGTTTGCCAATGAATCTTTCCAGCGAGGGAAAAAGCATTTGTTGAAGAACATTCAAAGGCGCAAGTCAACTCAATCCCAGCAGGTTGGTAGCTATATTGGGCCTTTTACTGAAGCAGGGAAGCCGGGAGTTGAGGTTGAGGTAGAAAGgctaagaaaagagaagagcaTGTTAATGCGAGAGATGGTTGATTTGCAGCAACAGCAGCGAAGGACAGTTCACCATGTGGGAGAAGTGAACCAAAGACTTCAGTCTGTTGAGCAGAGACAGAAACAAATGATGTCTTTCTTGGCAAAGTTGTTTCAAAACCCAGCTTTTTTAGCTCGACTTCTGCAAAAGAAGGAACAGAAAAATGGAGGTTCTTCTAGAGTGAGAAAGAAGTTTATCAAGCACCACCAACATGACGCAGGAACTTCAGATTCTTTGAGGGAAGGTCAGATTGTAAGATACCAACCTGATTTCAGAAATATAGCCTTATCTTCTAAAACACCAGAATTAATTCCCGTTTCTATTGAAAAGTCTCCTGGATACCCTTCACAGGGTTTGGCAGGAGAACAGTGTTCAGGCACAGAAAATCAGAATTTGGAACTTGAGAATTTTGCATCAGATGAATTCGCTGTAGCTCATGAGATGACGGCAATGCCAGAGATAGGACGAGAAGGGTCATCAAGCTCAGGACTTGAAGATCCCCTTTTCAAGGGAAAAAACCTCATGAGCCCAGAACAAGAAGTTGTTCCACAatactttgtttctttcccaGAGAATTTGACCAAGGAGAATGCCTTTCCAGAGTGTCCCCTTCCTGAAACTGAAAGCATCATCAAACAAGAAGATATATGGAATCCAGGCTTTGGTGGTACTGATGCTGCTTCTGTCTCTGGGAATGAGCTGTGGGGAAATCCAATCAATTATGAGTTGCCAGAATTTGGAGTGACAGGAGGTATGTCAGACATCTGGGATATAAGCTCTTTGCAAGCTACTGGAAGTTTAGGTATTGAAAAGTGGCCAACTGATGATTCCCCTCCTGGAGAAACAGAAACTCAAGGTGGTTA 1760 0.4222 MNPNDQDNPNSTTRYPGKAPADSSLGKGTVGLSSTKLDRSESLSDPRSFVLAPQFGDTSAGLSMADIGLSGPLPSSPLMEFEASSTINPLSSAELIATSVELENACVPQPLESLQGNPVPPFLSKTFDLVDDPSLDPIISWSLTGGSFVVWDPVEFARIILPRNFKHNNFSSFVRQLNTYVDDAKLCFICVFLAYLIRTETAIGTGQRRNISPPECPLWWGFHLPQGFRKIDTDKWEFANESFQRGKKHLLKNIQRRKSTQSQQVGSYIGPFTEAGKPGVEVEVERLRKEKSMLMREMVDLQQQQRRTVHHVGEVNQRLQSVEQRQKQMMSFLAKLFQNPAFLARLLQKKEQKNGGSSRVRKKFIKHHQHDAGTSDSLREGQIVRYQPDFRNIALSSKTPELIPVSIEKSPGYPSQGLAGEQCSGTENQNLELENFASDEFAVAHEMTAMPEIGREGSSSSGLEDPLFKGKNLMSPEQEVVPQYFVSFPENLTKENAFPECPLPETESIIKQEDIWNPGFGGTDAASVSGNELWGNPINYELPEFGVTGGMSDIWDISSLQATGSLGIEKWPTDDSPPGETETQGG 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02469 586 Gene3D - 115 258 IPR036388 -
Bva04g02469 586 SMART hsfneu3 118 257 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva04g02469 586 Pfam HSF-type DNA-binding 122 257 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva04g02469 586 PRINTS Heat shock factor (HSF) domain signature 122 145 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva04g02469 586 PRINTS Heat shock factor (HSF) domain signature 160 172 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva04g02469 586 PRINTS Heat shock factor (HSF) domain signature 173 185 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva04g02469 586 MobiDBLite consensus disorder prediction 566 586 - -
Bva04g02469 586 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 107 578 IPR027725 -
Bva04g02469 586 MobiDBLite consensus disorder prediction 1 43 - -
Bva04g02469 586 SUPERFAMILY "Winged helix" DNA-binding domain 120 180 IPR036390 -
Bva04g02469 586 Coils Coil 284 304 - -
Bva04g02469 586 MobiDBLite consensus disorder prediction 1 18 - -
Bva04g02469 586 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-3 107 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02469 Bva-Chr4 22500446 22503258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02469 96 575 HSF AT5G03720 40.524 1.12e-99 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bva04g02469 HSF_DNA-bind 1.6e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02469 K09419 - gmx:100780835 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02469 04 22500446 22503258 Bva04g02469 04 22500446 22503258 ECH