Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02463 ATGGAAATGGAGGATCATcaccatcttcatcttcatcgtcacaataatcataatcatcatCACCATCATCATCGCCAACAAGAGCAGTATAACATAACCGATCTCAGACAACTCATGAACGGAGCAAGGTCATCGTCTTCCACTCATTTCCCTTGCATCCCAGCTCCAACGCAACCCACAGCGGAGCTATTCCCCGGTCACCGAAATCTCGCAACGACGCCCACACCAACCCACCACCAACACTATGAGATGATGATGTTTGGTCGTCCCGTAGCTGACATAATGCATCGTGGCCTTCACGATTTTGTTGCAGCTTCCGATTCTGCTACTGGtgctgttgctgttgctgttgctCCCACTAATACCAGCATTACTGTAGCAACTCCCACCACAACCAGCACCTCGACTCCTCCTCTTAGTGGCTTAGAGGCTGAGACCACGGCCTGGCTTGGTGGAGACGCCTCCACCGGACGCTGGCCCAGACAAGAGACTCTTACTCTTCTTGAGATCAGATCTCGTCTTGACCCTAAATTCAAAGAGGCTAATCAAAAGGGACCCTTATGGGACGAGGTTTCAAGGATCATGTCAGAAGAACATGGGTATCAAAGGAGTGGTAAAAAATGCAGGGAAAAGTTTGAAAACTTGTACAAATATTACAAGAAGACCAAGGAAGGCAAGGCAGGAAGGCAAGATGGGAAGCATTACAGATTCTTTCGTCAACTTGAAGCCTTATATGGAGAAAACAGTAATACAACCTCAATCCCAGAAACCAATTTTGGTGGTAGCAGTCTTCGTTTTCAGACAAGCAGCCATGGCCCCTCCCAAACGAATCAAGAAATGCTTCAATCTCACAAGCAATGTGATAGCCTCAGCCTTACTAACTCCACTGATTTTGACACATCATCATCTGATGATAATGATATCAGCACAGTCGGGTTAATGGACAATGACTCCAtggagaaaaggagaaaaaggaagagtgGAAGGAGCTGGAAGgtaaagataaaagatttcATTGACTCACAGATGAGGAAGCTGATGGAGAAGCAAGAGACTTGGTTGGAGAGACTCGTGAAAACAAtggaacaaaaggaaaaggagaggGCTTTAAGAGAGGAAGAATGGAGGAGACAAGAGGCAGCCAGGTTAGAAAGGGAGCACAAATTTTGGGCTAGAGAGAGAGCATGGATTGAAGCCAGGGATGCTGCTTTAATTGATGCCTTGCAAAACTTAACAGGAAGGCAGATAAAGGCTCATTCTCCTGAAGGTCTAATGGCTGctgaaattcaaaatcataacGAAAACCAGAATGAAGATGGTAGCGAAATATTAAATAGCACGGCTAGAGGTGCTGGCTGGACAGAATCCGAGATTTCAAGGCTTTTACAGTTGAGAGCTGAGATGGAGTCGAGGTTCCAACAAAGTGGATGTTCAGAAGAGGTTCTGTGGGATGAAGTTTCAACCAAAATGGCTTGTTTTGGCTATGAAAGGACCGCTTCAATGTACAAAGATAAATGGGAAAGCATCACTAACTTTCCAAGGAATGCCAAGGAAGCAAACAAGAAGCGCAAGGAAAATTCAAGAAGTTGTTTTTACTTTGGGAACAATGATCAATCTTCCCTATATAATCATGGAAGTGCCATTTGTGAAATGAACCAACAACAGCAGGATGGTGGGAGACTACAGGCAAATGATGGTTCTTCACCTTCAAATTCCAATGTTGCGAATGCAGTTCCAGCTGAAAGTTGTTTTCCCTTCTTGATGAGTGAGGGAGAAAATCTGTGGGAGAACTATGCATTAAAGCTCAATAAAGGAAACCAAAACCAATG 1829 0.4139 MLQSHKQCDSLSLTNSTDFDTSSSDDNDISTVGLMDNDSMEKRRKRKSGRSWKVKIKDFIDSQMRKLMEKQETWLERLVKTMEQKEKERALREEEWRRQEAARLEREHKFWARERAWIEARDAALIDALQNLTGRQIKAHSPEGLMAAEIQNHNENQNEDGSEILNSTARGAGWTESEISRLLQLRAEMESRFQQSGCSEEVLWDEVSTKMACFGYERTASMYKDKWESITNFPRNAKEANKKRKENSRSCFYFGNNDQSSLYNHGSAICEMNQQQQDGGRLQANDGSSPSNSNVANAVPAESCFPFLMSEGENLWENYALKLNKGNQNQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02463 330 Pfam Myb/SANT-like DNA-binding domain 174 256 IPR044822 -
Bva04g02463 330 Gene3D - 174 245 - -
Bva04g02463 330 Coils Coil 68 95 - -
Bva04g02463 330 ProSiteProfiles Myb-like domain profile. 166 231 IPR001005 -
Bva04g02463 330 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 4 326 - -
Bva04g02463 330 CDD GT1 174 238 - -
Bva04g02463 330 PANTHER - 4 326 - -
Bva04g02463 330 MobiDBLite consensus disorder prediction 1 49 - -
Bva04g02463 330 MobiDBLite consensus disorder prediction 1 34 - -
Bva04g02463 330 MobiDBLite consensus disorder prediction 274 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02463 Bva-Chr4 22468547 22472212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02463 46 325 Trihelix Transcription Factor Family AT5G03680 44.118 2.26e-71 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva04g02463 Myb_DNA-bind_4 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02463 - - gmx:100813245 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02463 04 22468547 22472212 Bva13g02091 13 16547108 16550606 BWGD
Bva04g02463 04 22468547 22472212 Bva04g02463 04 22468547 22472212 ECH