Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02457 atgGACTTCCATCTGAAGGAATGGAGAAACCAGCATGAGTCAGAGCAACAACATTCTGCAAAGATGCCAAAACTTCTCCTTGAACCCCATCAACAGCCACCATCATCTGCCTCTgctcttcctttgtttgtACCTGAACCCAGCAGCAAAGTCAGCACCTTGTCAGCATTTTCTGATTCAACAATAGCTACTACCAGTTTTCCCAGGATGGGGAATTTTTTCAGCGTGGCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATATTCAGGTACATGTTAGCCGGTGCTACTGTTCCTCCTGAGCTCCTTCAGCCAATCAAGAAAAGCCTTCTCCATTCCCCTGCGTACTTCCTCCATCACCCTCTACAACATTATCCACATTATCAACCTGTGTTGCAAGCAGGGTACTGGGGAAGAGCTGCCATGGATCCAGAGCCCGGCCGTTGCCGGAGGACCGACGGCAAAAAATGGCGGTGCTCGAGGGACGTGGTGGCCGGACAGAAGTACTGCGAGCGCCACATGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAACCACCCCTGTTGGTGCTGCTACTGGTAGTGGGAGTCTCGGTGCTACAGCCTCAGTTTCTGCACCCCCTTTGACAACAGCATCATTAAAATCCCCTTTTGATCTTCTTCAACTTAATCAAAGTTCCTCTCTGACCAAGAATGAAAACAAGAGCCCGTTTGAAAGCCAAGAAAATGTGGGTGGGGATGGAAGATCTGATGGCCATATTTTGCGGCATTTTTTTGACGATTGGCCACGATCACTTCAAGAATCTGATGTTGGTAAAAGTTATGCTAGTAGCTCCATCAACTCGGCTACGTGTCTCTCTATTTCAATGCCGGGAAATACGTCTTCGGATGTGTCCTTGAAATTGTCGACCGGCAACGAGGATAATCCTTGTCCCAGAACTGGAAACGTTGACACGGAGCAACCCCAATTGAACTGGGGAGCAGCCTGGACTTCGGCTAATCAAGTGGCTTCCATGGGAGGACCGCTTGCAGAAGCGCTGAGATCATCTACATCAACCTCTTCGCCGACCAGTGTTCTACATCAATTGCCTCGAGGTTCTGTCTCTGAGACGAGCTTTATCGGCACATA 1145 0.49 MDFHLKEWRNQHESEQQHSAKMPKLLLEPHQQPPSSASALPLFVPEPSSKVSTLSAFSDSTIATTSFPRMGNFFSVAQWQELELQALIFRYMLAGATVPPELLQPIKKSLLHSPAYFLHHPLQHYPHYQPVLQAGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVELPTPTTPVGAATGSGSLGATASVSAPPLTTASLKSPFDLLQLNQSSSLTKNENKSPFESQENVGGDGRSDGHILRHFFDDWPRSLQESDVGKSYASSSINSATCLSISMPGNTSSDVSLKLSTGNEDNPCPRTGNVDTEQPQLNWGAAWTSANQVASMGGPLAEALRSSTSTSSPTSVLHQLPRGSVSETSFIGT 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02457 381 MobiDBLite consensus disorder prediction 193 209 - -
Bva04g02457 381 MobiDBLite consensus disorder prediction 232 257 - -
Bva04g02457 381 MobiDBLite consensus disorder prediction 1 20 - -
Bva04g02457 381 PANTHER GROWTH-REGULATING FACTOR 3 9 381 - -
Bva04g02457 381 PANTHER - 9 381 IPR031137 GO:0005634|GO:0006351|GO:0032502
Bva04g02457 381 Pfam WRC 144 186 IPR014977 -
Bva04g02457 381 ProSiteProfiles QLQ domain profile. 73 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva04g02457 381 MobiDBLite consensus disorder prediction 350 381 - -
Bva04g02457 381 Pfam QLQ 74 106 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva04g02457 381 MobiDBLite consensus disorder prediction 1 19 - -
Bva04g02457 381 MobiDBLite consensus disorder prediction 349 381 - -
Bva04g02457 381 SMART QLQ_2 72 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Bva04g02457 381 MobiDBLite consensus disorder prediction 302 325 - -
Bva04g02457 381 MobiDBLite consensus disorder prediction 172 209 - -
Bva04g02457 381 MobiDBLite consensus disorder prediction 232 248 - -
Bva04g02457 381 ProSiteProfiles WRC domain profile. 143 187 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02457 Bva-Chr4 22425809 22428291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02457 1 368 GRF Transcription Factor Family AT3G52910 54.381 7.94e-105 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Bva04g02457 WRC 2.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02457 - - qlo:115953466 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02457 04 22425809 22428291 Bva13g02097 13 16592986 16596044 BWGD
Bva04g02457 04 22425809 22428291 Bva04g02457 04 22425809 22428291 ECH