Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02453 ATGGCTTCGGCATTGGCGGGAGATGATTTGGCCGTTCCAACGAGTAGTCGCCGGAGCTGGCGATCGGCAAGTTTCAGGGAGAGTTTCAAGGAGATGTGGGCGGCGCCACCGGACGTGTTCAACAGAACTGGTGGAGTCTCACAAGAGAATGACGAGGAACAGCTCAAATGGGCCGCCATTGAGCGGTTGCCGACGTATGACCGGCTAAGGAAAGGGATACTAAGGCAAGTGCTCGATGACGGAAAAGTTGTGCACGAGGAAGTTGATGTCACTAAGCTTGGCTTGCAGGATAAGAAGATGCTGATGGAGACTATACTCAAGTTTGTTGAGCAAGACAACGAGAAATTCCTTCGCAGATTGAGAGACAGAATTGATAGAGTACAGATTGAAACTCCCAAAATTGAAGTTCGTTATGAGAATTTATCTGTGGAGGGAGATGTGTATGTTGGAAGCAGAGCTCTTCCAACTCTGCTCAATGCCACACTCAACACTATAGAGAGTATTCTTGGATTGTTTCATCTCGCCCCGTCCAAGAAGAGGAAAATTCAGATTCTCAAAAATGTTAGTGGAATTGTCAAACCATCAAGGATGACCCTACTTTTGGGTCCTCCAGGTGCAGGGAAGACAACACTACTTATGGCACTTGCAGGCAAACTTGACTGGGATTTGAGGAAATCTGGGAGGATCACTTACTGTGGACATGCATTTTCTGAATTTGTTCCTCAAAAAACCTGTGCCTATATTAGTCAACATGACCTTCACCATGGAGAAATGACAGTGAGAGAAACATTGGATTTTTCAGGAAGATGTCTTGGAGTAGGCACCAGGTATGAAATGTTAGCGGAACTttcaagaagagaaaaagaattgggAATTAAGCCAGACCCTGAAATTGACGCATTTATGAAGGCTACAGCACTTTCAGGCCAAAAAAACAGTTTGGTTACAGACTATGTTCTTAAGATACTTGGATTGGATATTTGTGCGGATATTCTGGTTGGTGATGATATGAGAAGAGGAATATCTGGTGGACAAAAGAAGCGTGTGACAACAGGGGAGATGTTAACAGGACCAGCAATGGCACTCTTTATGGATGAAATATCAACAGGATTGGACAGTGCTAccacatttcaaatttGGATATGGGTTGTCCTTACATACTATACAATTGGATTTGCTCCTGGAGCTAGCAGATTTTTCCGACAATTCTTGGCATTCTTTGCCATTCATCATATggctctctctctatttcgGTTCATTGCTGCTATAGGAAGAACAATTGTTGTTGCAAATACACTGGGGACCTTCGCCATGCTCCTGGTGTTTGCGCTAGGAGGATTTGTCATTTCCAAAAATGACATAGAGCCATGGATGAAATGGGGCTTTTATATTTCTCCTATGATGTATGGACAGAATGCCATAGTCATGAATGAGTTTCTAGACAAGAGATGGAGTGGACCAAATAGAGACCCAAGATTTGATGCAGCTACAGTTGGAGAAGTTCTTCTCAAATCTAGAGGCTTCTTTACTGATGGTTATTGGTTTTGGATCTGCATTGGAGCCTTGTTTgggttttctcttctcttcaactttcTCTTCATTGTTGCATTGGCTTATTTAAATCCTTTTGGTGATTCAAAGGCAGTCATTATAGATGAAGGagataacaagaaaaataaaaagcatgcAGCAGATGCTATGGACATGGAAGTCAGGAATTCTTCAGAGATTGGTGGTGTTTCAAATCAAGCAAAAGCACCCCAAAGGGGAATGGTTTTACCATTCCAACCTCTCTCTCTTGCATTTGATCATGTGAGCTACCATGTAGATATGCCTGCAGAAATGAAGAAGCAAGGAATCCAAGAAGATCGACTTCAACTACTACAAGATGTCAGTGGTACCTCCAGACCAGGGGTATTGACAGCACTTGTGGGTGTTAGTGGTGCAGGGAAGACAACTCTCATGGATGTGTTAGCAGGAAGAAAGACCGGTGGTTACATTGAAGGACGTATCAGCATTTCAGGTTATCCAAAGAACCAATCTACATTTGCTCGGGTTAGCGGTTACTGTGAACAGAACGACATTCATTCCCCACATGTCACTGTCTATGAATCTCTATTATATTCAGCGTGGCTCCGCCTTTCTTCAAATGTGACGACAGAAACTAGAAAGATGTTTGTCGAAGAAGTTATGACATTGGTTGAGCTTAATCCTCTAAGAGATGCACTAGTGGGCCTTCCAGGAGTAGATGGCCTGTCAACAGAACAAAGGAAGAGGCTAACAATTGCAGTAGAACTGATTGCTAACCCATCAATCATCTTCATGGATGAACCAACATCTGGTCTTGATGCCAGGGCTGCCGCCATTGTTATGCGAACAGTGAGAAATACAGTTGACACGGGGAGAACGGTGGTGTGCACAATACACCAGCCAAGCATAGACATTTTTGAAGCTTTTGATGAGCTACTGCTGATGAAAAGAGGAGGACAAGTCATTTATGCTGGACCTCTTGGTCACCATTCCCATAAACTCATAGAATATTTTGAAGCTGTCCCAGGGGTCCCTAAAATTAAGGAAGGCTATAATCCTGCCACATGGATGCTTGACGTCACTGCTCCTTCAGTTGAGGCTCAGTTAAATGTGGATTTTGCACAGATTTATTCTAGTTCTGACCTTTACCAGAGGAATCAAGAACTTATCAAAGAGCTCAGTACTCCAGCACCGGGTTCCAAGGACCTCTCCTTTCCAACCAAATATTCACAATCGTTTTTTGTACAGTGCAAGGCTTGTTTTTGGAAACAGTATTGGTCTTACTGGAGGAACCCTCAATATAATGCTGTACGATTTTTCCTGACAATTGTCGTTGGAGTTTTATTTGGTCTTATCTTCTGGAAGAAAGGGAGCAAAACtCATAAAGAACAAGACTTGATGAATCTTTTGGGAGCCATGTATTCTGCTGTTTTTTTCCTTGGAACCACCAATTGCGCTTCTGTGATGCCTGTTGTTTACATTGAGAGAACTGTCTTCTATCGAGAAAGAGCAGCTGGAATGTACTCTGCATTGCCCTATGCATTTGGTCAGGTGGCAATAGAGGCAATTTATAATGCAATTCAAGCAGTCATTTATGCCTTTATCCTTTACTCCATGATGGGTTTTGAATGGAAGGCTGTGAATTTCTTATGGTTCTACTACTATGTATTAATGAACTTCATTTATTTCACATTGTATGGAATGATGCTTGTTGCATTAACTCCGGCCCACCAAATAGCCGCCGTTTGCATGTCTTTCTTTATGAGCTTTTGGAACTTGTTCTCTGGCTTTCTCGTTCTCAGGACACAAATCCCTGTTTGGTGGAGATGGTACTATTGGGCTTCTCCTGTTGCTTGGACATTATATGGCCTCGTTACCTCTCAAGTTGGTAACAAAAATGCAGAATTGGTGATACCAGGAGCTGGAAACATGGGATTAAAGGATTTCCTCAAACAAATTTTCGGTTATGACTATGACTTTCTTCCAGTAGTTGCTGCCGCTCATGTAGCATGGGTTATCCTTTTCACATTTGTGTTTGCCTTTAGTATCAAGTTCTTCAACTTTCTGAAAAGATG 3605 0.4147 MASALAGDDLAVPTSSRRSWRSASFRESFKEMWAAPPDVFNRTGGVSQENDEEQLKWAAIERLPTYDRLRKGILRQVLDDGKVVHEEVDVTKLGLQDKKMLMETILKFVEQDNEKFLRRLRDRIDRVQIETPKIEVRYENLSVEGDVYVGSRALPTLLNATLNTIESILGLFHLAPSKKRKIQILKNVSGIVKPSRMTLLLGPPGAGKTTLLMALAGKLDWDLRKSGRITYCGHAFSEFVPQKTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYEMLAELSRREKELGIKPDPEIDAFMKATALSGQKNSLVTDYVLKILGLDICADILVGDDMRRGISGGQKKRVTTGEMLTGPAMALFMDEISTGLDSATTFQIWIWVVLTYYTIGFAPGASRFFRQFLAFFAIHHMALSLFRFIAAIGRTIVVANTLGTFAMLLVFALGGFVISKNDIEPWMKWGFYISPMMYGQNAIVMNEFLDKRWSGPNRDPRFDAATVGEVLLKSRGFFTDGYWFWICIGALFGFSLLFNFLFIVALAYLNPFGDSKAVIIDEGDNKKNKKHAADAMDMEVRNSSEIGGVSNQAKAPQRGMVLPFQPLSLAFDHVSYHVDMPAEMKKQGIQEDRLQLLQDVSGTSRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGRISISGYPKNQSTFARVSGYCEQNDIHSPHVTVYESLLYSAWLRLSSNVTTETRKMFVEEVMTLVELNPLRDALVGLPGVDGLSTEQRKRLTIAVELIANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYAGPLGHHSHKLIEYFEAVPGVPKIKEGYNPATWMLDVTAPSVEAQLNVDFAQIYSSSDLYQRNQELIKELSTPAPGSKDLSFPTKYSQSFFVQCKACFWKQYWSYWRNPQYNAVRFFLTIVVGVLFGLIFWKKGSKTHKEQDLMNLLGAMYSAVFFLGTTNCASVMPVVYIERTVFYRERAAGMYSALPYAFGQVAIEAIYNAIQAVIYAFILYSMMGFEWKAVNFLWFYYYVLMNFIYFTLYGMMLVALTPAHQIAAVCMSFFMSFWNLFSGFLVLRTQIPVWWRWYYWASPVAWTLYGLVTSQVGNKNAELVIPGAGNMGLKDFLKQIFGYDYDFLPVVAAAHVAWVILFTFVFAFSIKFFNFLKR 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02453 1201 Gene3D - 613 848 IPR027417 -
Bva04g02453 1201 Pfam ABC transporter 628 780 IPR003439 GO:0005524
Bva04g02453 1201 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 380 1200 - -
Bva04g02453 1201 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 24 379 - -
Bva04g02453 1201 Pfam ABC transporter 185 366 IPR003439 GO:0005524
Bva04g02453 1201 Pfam ABC-2 type transporter 809 880 IPR043926 GO:0140359
Bva04g02453 1201 Gene3D - 172 405 IPR027417 -
Bva04g02453 1201 PANTHER ATP-BINDING CASSETTE TRANSPORTER 380 1200 - -
Bva04g02453 1201 PANTHER ATP-BINDING CASSETTE TRANSPORTER 24 379 - -
Bva04g02453 1201 Pfam Plant PDR ABC transporter associated 492 550 IPR013581 -
Bva04g02453 1201 SMART AAA_5 637 829 IPR003593 -
Bva04g02453 1201 SMART AAA_5 194 434 IPR003593 -
Bva04g02453 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 837 IPR027417 -
Bva04g02453 1201 Pfam ABC-2 type transporter 926 1137 IPR013525 GO:0016020|GO:0140359
Bva04g02453 1201 Pfam ABC-2 type transporter 376 479 IPR013525 GO:0016020|GO:0140359
Bva04g02453 1201 Pfam ABC-transporter N-terminal 110 160 IPR029481 -
Bva04g02453 1201 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 600 852 IPR003439 GO:0005524
Bva04g02453 1201 CDD ABCG_PDR_domain2 597 835 IPR034003 -
Bva04g02453 1201 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 169 441 IPR003439 GO:0005524
Bva04g02453 1201 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 380 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02453 Bva-Chr4 22394423 22402792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02453 625 812 Calmodulin-binding Proteins AT2G36910 27.363 4.81e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02453 K08711 - gmx:100786482 1369.76