Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02450 ATGGGTTCATTCTCTGGCACTTCAGAAATAGTTGAAGCAACGGAAGAGCTAAATGCAGGGAAAAATGAGAAGCTTCCAGTGCTGAAACTGGGATACAAGGATAATATAGTTGATGacattaataaattgtttgaatCAATTAGTCTGAAAAATTCAAAGGACTTAGCTCTTCTTCAAGATGGCACAAGCCCTAAGATGAAAAATGCCTTAAAAAAGCCTATCACCATGGGTGTTTCTCGATCCCCACGAATTGGGACTTCTGAGCCAGTGACTTTGAAGCAGGCACTGAGAGACCTATGCATATCCAAGGCATCGGAAATGGCTGCTATGAAGCGATTATCCAAGTCAACAACAGCTTCTCCAAGAGTATCTGAGGTTGGGAAGATAAAGACATTGTACAATTCAGTTGTAGCTGAACCCAATCGAGCAGGGCCTTCTTTTGTTGAGAGTAAGGGGAGTATGTTTGAAATATCTTTGGTGCCAGAAGAATGCAAGTCAAACTCCTTGAATGAAATATCCCAGTCTTGTCAAACTGAAGGTGGGAAGATAAAAGCATTGCACAAATCAGTTATAGCTGAAGCCAGTCATTCATGGCCTTCTTTTGTTGAGAGTAAGGGAAGTATAACTGAAACTTGTTCAGTTCCAGGcgaaatcaaatcaatttccTCAGAGAAAACGTCCCAGACTCATCAAAATGCCAAAATCATATCATCGAGCCAGAAGCTTCGTCAATCTCTCAAAATGGCGATTGCAACTGAGGATGATGCTGAGACTTCTCTGGTGCAAAGTGATGTGGTCTGTTCACCAACTAAGTTTGGTGTTCAATCACAAAGAGTGGAGACTGCTCAGACAGAAAAACAAATGCCTGCACATTCTCTGTCGCTTTCTAATACTAATGCAAGCAAATTAGAGGTGCCAGAAAATGTTTCTTCTTCcaaaaaattaggaaataaaTCATTGGTGCCAAAGAATGGGCGGAAAGGTAGGTCACAAACAGTATCTTTATTGTCTAGTTCAGTAAATGGTAATAGATTGAACAAATTGTCCTGCAGTACTCCCCGTACAGTCAAATCAGTCATCAGGAACAAGAATTTGAGTAAGAAGAAACTAAAGCAGGATTCAAATTCTGCAAGTGTTCTTACATCCaatgaaatgaataataaGTCAGTTCCTGGTCAAACTCAACTGATTTGTGAGAGATGCAGATGTGTTTTAGAGAATACAAGAATTGGAGACTGTCCAGATTCTATTGCATCAGAATCTACCAGTCCTGGAGATGGTGTGGACTCCAATAATGTTCATGCGGGTGCAAATAATCCTGTTTTGACATCAACTAGCTGTAACGGAAGCAGAGTAGTTGCAAGAGTGAAAAAGACTAACAGATTGAGAGAGCAACTTGAATTTTCACAAAGCTCAAAAAGTAGCCAAGGCGAGTACAGTAGTAGTACCAGTACCAGCGAAGATAGCAACGTGAGTGGGTTTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGGTGGGAAGCCATACGTCATGCATACATGCAGCATGGAGTCTTGGGCTTGAGACAATTCAACCTTTTAAAGAAACTTGGTTGTGGAGACATTGGGACTGTATATCTTGCAGAACTAATTGGCACCAATTGCTTATTTGCTATTAAGGTTATGGACAATGAGTTTTTGGCTAAACGAAAGAAGATGCCTAGGGCCCAAactgaaagagaaatattaagGATGCTAGATCATCCTTTTCTCCCAACACTCTATGCGCAATTTACATCAGATAATCTGTCATGTCTGGTTATGGAGTATTGTCCAGGGGGAGATCTTCATGTCCTACGGCAGAAGCAGCTTGGTAGAAGTTTCTCTGAGCCAGCAGCAAGGTTTTATGTTGCCGAAGTCCTTCTCGCTTTGGAGTATTTGCACATGCTTGGAGTTGTTTACCGTGATTTGAAACCCGAAAACATTCTTGTTCGAGAAGACGGACACATTATGCTCACGGATTTTGATCTGTCACTTAGGTGTGCTGTTAGCCCAACACTTCTGAAATCATCGTCTGATATGGACCCCGCAAAGATTTCTGGTCCTTGTATACGGTCTAGTTGCATTGAACCCTTATGTATCGAACCACCGTGTCAAGTTCCATGCTTCAGCCCTAGATTCTTACCCGCTTCtgcaaaagcaagaaaagcaaaagccgATCTTGTTGCCCATTTCAGATCATTGCCACAGCTAGTGGCTGAGCCTACTGATGCAAGATCAAATTCTTTTGTTGGCACACATGAATACCTGGCTCCCGAGATCATCAAAGGAGAGGGGCATGGAGCTGCCGTTGATTGGTGGACATTTGGTGTTTTTCTTTACGAACTATTATACGGCAGAACACCTTTTAAAGGTTCTAACAATGAAGAAACATTAGCCAATGTAGTGTTACAAGGCCTCAGATTCCCAGACAGCCCATTTGTTAGTTTCCAAGCAAGGGATCTCATAAGAGGGTTGCTGGTTAAAGAGCCTGAAAATCGTTTGGGTTCAGAGAAAGGAGCAGCTGAGATTAAACAGCACCCCTTCTTTGAGGGGCTAAATTGGGCATTAATACGTTGTGCCATCCCACCGGAGATACCGGACTTCTGTGATTTTGGAATTTCAGAGTTGATCCCACAGCCACAGGGAATGGGCAAGCACTTTGAGTGTAATGCAACAGGTCAGCACGTGGAATTTGAGTTGTTTTA 2732 0.4092 MGSFSGTSEIVEATEELNAGKNEKLPVLKLGYKDNIVDDINKLFESISLKNSKDLALLQDGTSPKMKNALKKPITMGVSRSPRIGTSEPVTLKQALRDLCISKASEMAAMKRLSKSTTASPRVSEVGKIKTLYNSVVAEPNRAGPSFVESKGSMFEISLVPEECKSNSLNEISQSCQTEGGKIKALHKSVIAEASHSWPSFVESKGSITETCSVPGEIKSISSEKTSQTHQNAKIISSSQKLRQSLKMAIATEDDAETSLVQSDVVCSPTKFGVQSQRVETAQTEKQMPAHSLSLSNTNASKLEVPENVSSSKKLGNKSLVPKNGRKGRSQTVSLLSSSVNGNRLNKLSCSTPRTVKSVIRNKNLSKKKLKQDSNSASVLTSNEMNNKSVPGQTQLICERCRCVLENTRIGDCPDSIASESTSPGDGVDSNNVHAGANNPVLTSTSCNGSRVVARVKKTNRLREQLEFSQSSKSSQGEYSSSTSTSEDSNVSGFSCGNRPHMSKDVRWEAIRHAYMQHGVLGLRQFNLLKKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLAKRKKMPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSSDMDPAKISGPCIRSSCIEPLCIEPPCQVPCFSPRFLPASAKARKAKADLVAHFRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPDSPFVSFQARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAIPPEIPDFCDFGISELIPQPQGMGKHFECNATGQHVEFELF 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02450 910 MobiDBLite consensus disorder prediction 364 389 - -
Bva04g02450 910 PANTHER FLIPPASE KINASE 1-RELATED 174 910 - -
Bva04g02450 910 MobiDBLite consensus disorder prediction 464 498 - -
Bva04g02450 910 CDD STKc_phototropin_like 524 876 - -
Bva04g02450 910 Pfam Protein kinase domain 527 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02450 910 Pfam Protein kinase domain 755 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02450 910 Gene3D Phosphorylase Kinase; domain 1 524 605 - -
Bva04g02450 910 Gene3D Transferase(Phosphotransferase) domain 1 606 674 - -
Bva04g02450 910 SMART serkin_6 526 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02450 910 MobiDBLite consensus disorder prediction 279 331 - -
Bva04g02450 910 SUPERFAMILY Protein kinase-like (PK-like) 503 874 IPR011009 -
Bva04g02450 910 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 178 - -
Bva04g02450 910 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 174 910 - -
Bva04g02450 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Bva04g02450 910 MobiDBLite consensus disorder prediction 371 389 - -
Bva04g02450 910 MobiDBLite consensus disorder prediction 465 497 - -
Bva04g02450 910 MobiDBLite consensus disorder prediction 414 442 - -
Bva04g02450 910 Gene3D Transferase(Phosphotransferase) domain 1 751 875 - -
Bva04g02450 910 ProSiteProfiles Protein kinase domain profile. 526 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02450 910 PANTHER FLIPPASE KINASE 1-RELATED 1 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02450 Bva-Chr4 22370076 22373685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02450 1 910 AGC Kinase Gene Family AT2G36350 49.899 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva04g02450 Pkinase 1.4e-36 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02450 04 22370076 22373685 Bva13g02100 13 16608444 16613518 BWGD