Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02447 ATGAAGGTGGTCGCTGCGTATTTGCTCGCCGTCTTGGGAGGCAACACAACCCCATCCGCCGATGACCTCAAATGCATCCTTGGCTCCGTTGGAGCAGAGGCTGACGATGACAATATTCAACTTCTTCTGTCTGAAGTCAATGGGAGAGATATAGCAGAACTAATTGCCATGGGGAGGGAAAAGTTGGCATCAGTACCTTCGTGTGGTGCTGCTGTATCTGTTCCTTCTAGTGGAGGAGGAGCTGCTGCTCCTACTTCTGATGCTCCTGtgacaaagaaagaagaaaaggtggAGGAGAAAGAGGAATCTGATGATGATATGGGCTTCAGTCTCTTTGATTA 341 0.4604 MKVVAAYLLAVLGGNTTPSADDLKCILGSVGAEADDDNIQLLLSEVNGRDIAELIAMGREKLASVPSCGAAVSVPSSGGGAAAPTSDAPVTKKEEKVEEKEESDDDMGFSLFD 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02447 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Bva04g02447 113 Hamap 50S ribosomal protein L12 [rpl12]. 2 113 IPR027534 GO:0003735|GO:0005840|GO:0006414
Bva04g02447 113 Gene3D - 1 58 IPR038716 -
Bva04g02447 113 CDD Ribosomal_P2 1 113 IPR044076 GO:0002182|GO:0003735|GO:0022625
Bva04g02447 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 113 - -
Bva04g02447 113 MobiDBLite consensus disorder prediction 69 113 - -
Bva04g02447 113 Pfam 60s Acidic ribosomal protein 18 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02447 Bva-Chr4 22356083 22357500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02447 1 113 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 63.717 1.44e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02447 K02943 - qsu:111996733 140.584