Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02437 AtgcagagaagaagagagaacgATATGGCAGAAGAGCACCGATGCCAAGCCCCAGAAGGCCACCGACTCTGCGCCAACAACTGCGGCTTCTTCGGTAGCGCAGCCACCATGAACCTCTGTTCCAAATGCTACAGAGATTTCCGTCTGAAAGAACAACAAGAAGCCTCTACCAAATCCACCGTCGAAGCCGCTCTGTTTCCGTCATCGCCGTCCCCGCCCGTCGAATCTCTGCCTCCTCATCCAGCGTTGACATTGACGGAGGTTGCGGCAGACGCATCGAGCCCGGCATCCGCGGCCGTGGGACCGGATAGGACGACAGCGCAGCCGAACCGATGCGCGACGTGCCGCAAGCGGGTCGGGTTTTCCGGGTTCAAGTGCAAGTGCGGTGTGACGTTTTGCGGGGTCCACAGGTACCCGGAGAAACATGGGTGCAGCTTCGATTTTAAGAAAGTGGGGCGAGAGGAAATAGCTCTTGCAAATCCCGTCATCAAAGCTGAGAAGCTGAACAAGATTTG 515 0.5495 MQRRRENDMAEEHRCQAPEGHRLCANNCGFFGSAATMNLCSKCYRDFRLKEQQEASTKSTVEAALFPSSPSPPVESLPPHPALTLTEVAADASSPASAAVGPDRTTAQPNRCATCRKRVGFSGFKCKCGVTFCGVHRYPEKHGCSFDFKKVGREEIALANPVIKAEKLNKI 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02437 171 ProSiteProfiles Zinc finger AN1-type profile. 106 152 IPR000058 GO:0008270
Bva04g02437 171 SUPERFAMILY AN1-like Zinc finger 102 166 IPR035896 -
Bva04g02437 171 Gene3D - 87 167 IPR035896 -
Bva04g02437 171 SMART AN1_Zf_4 112 149 IPR000058 GO:0008270
Bva04g02437 171 Pfam A20-like zinc finger 22 45 IPR002653 GO:0003677|GO:0008270
Bva04g02437 171 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 6 9 171 - -
Bva04g02437 171 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 23 69 - -
Bva04g02437 171 Pfam AN1-like Zinc finger 112 148 IPR000058 GO:0008270
Bva04g02437 171 ProSiteProfiles Zinc finger A20-type profile. 18 52 IPR002653 GO:0003677|GO:0008270
Bva04g02437 171 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 171 - -
Bva04g02437 171 Gene3D - 7 70 - -
Bva04g02437 171 SMART A20_3 21 45 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02437 Bva-Chr4 22315746 22316261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02437 9 171 C2H2 Transcription Factor Family AT3G52800 57.059 3.28e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02437 - - csv:101211758 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02437 04 22315746 22316261 Bva13g02112 13 16683395 16684963 BWGD
Bva04g02437 04 22315746 22316261 Bva04g02437 04 22315746 22316261 ECH