Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02396 ATGGAAAACATGCCACCGGGTTACCGTTTCTACCCAACCGAAGAGGAGATCGTTTCATTCTATCTTCGTAACAAGCTCGATGGAGAGAGACATCAGGACATGAACCGGATCATTCCGGAGCTTGATATCTACGATTACAACCCCTGGGATCTCCCAcAGGTTTCTGGAGTGGCGAACCTGAGAGACACCGAACAGTGGTTCTTTTTCGTTCCACGGCAGGAAAGTGAAGCCCGCGGGGGAAGGCCGAAGCGGCTAACCACTACCGGCTACTGGAAGGCAACGGGGTCTCCTAGTCAAGTTTATTCTTCTGATAATCGCATCATCGGCATGAAAAGAACCATGGTTTTCTACGGTGGAAGAGCCCCAAACGGAAAGAAAACCGCGTGGAAGATGAATGAATACAAGGCCTTTAATAGATCACCTCCTACATTAAGTCATGAATTCAGTTTATGCCGAGTGTACAAAAAACTGAAATGCCTAAGGGCATTTGATAGAAGGCCACCACCAAGGAAGGACTATCCTAGTGGTAGTACTCATCATCAGAAAGATGAAGAATTAGGTTCAACATCTCATCAGAATAATCCTAATGATCAAGAAGCGCAGAGAGCAGCAAGCTCATCATCAGAGAGTTCATCATCTGGAGATGGGGGTCAACCCTCCCACGGTGGCGAAGGCAGTCAAATGGATTTTGACGCTGAACCTTTGTTGGATTGGGAGCAAGTTGATTTGTTTCTTCGAGACCATGCATG 749 0.47 MENMPPGYRFYPTEEEIVSFYLRNKLDGERHQDMNRIIPELDIYDYNPWDLPQVSGVANLRDTEQWFFFVPRQESEARGGRPKRLTTTGYWKATGSPSQVYSSDNRIIGMKRTMVFYGGRAPNGKKTAWKMNEYKAFNRSPPTLSHEFSLCRVYKKLKCLRAFDRRPPPRKDYPSGSTHHQKDEELGSTSHQNNPNDQEAQRAASSSSESSSSGDGGQPSHGGEGSQMDFDAEPLLDWEQVDLFLRDHA 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02396 249 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 242 - -
Bva04g02396 249 MobiDBLite consensus disorder prediction 164 233 - -
Bva04g02396 249 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 242 - -
Bva04g02396 249 Gene3D NAC domain 13 159 IPR036093 GO:0003677|GO:0006355
Bva04g02396 249 MobiDBLite consensus disorder prediction 188 220 - -
Bva04g02396 249 Pfam No apical meristem (NAM) protein 5 135 IPR003441 GO:0003677|GO:0006355
Bva04g02396 249 SUPERFAMILY NAC domain 2 156 IPR036093 GO:0003677|GO:0006355
Bva04g02396 249 MobiDBLite consensus disorder prediction 164 187 - -
Bva04g02396 249 ProSiteProfiles NAC domain profile. 4 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02396 Bva-Chr4 22140278 22141689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02396 7 241 NAC Transcription Factor Family AT5G22380 50.000 1.40e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva04g02396 NAM 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02396 - - gmx:100777948 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02396 04 22140278 22141689 Bva04g02396 04 22140278 22141689 ECH