Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02385 ATGGCGGCtatcaaaagaataattgGAACCTCTAATGCTTTGTCTCGCTCCTCCTTCATTCCTTCAGCTCGCCTTATTTTTTGCAGAGGAATTGCATTCAAGCTTTTCGTTGGAGGATTGTCATCTTACACAGCAGAGAAGGGATTATCAGAGGCATTTTCTCGATATGGTCAAGTTATTGAAGCTAAAATTGTGACGGATAGGGTGTCTGACAGATCAAAAGGCTTTGGGTTTGTCACCTTTGCTTCAGAGGATGAGGCTGAGAATGCAATATCAGAGATGAACGGAAAGGCGCTGAACGGACGTGTTATATTTGTCGATTATGCAAAACCCAAATCCAATTTTGGCGAGGGAACGCCAATTGCCAGAGGACCTCCTGAACCTACAGCAAACAGTTG 398 0.4296 MAAIKRIIGTSNALSRSSFIPSARLIFCRGIAFKLFVGGLSSYTAEKGLSEAFSRYGQVIEAKIVTDRVSDRSKGFGFVTFASEDEAENAISEMNGKALNGRVIFVDYAKPKSNFGEGTPIARGPPEPTANS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02385 132 PANTHER TRANSFORMER-2-RELATED 1 131 - -
Bva04g02385 132 Gene3D - 22 116 IPR012677 -
Bva04g02385 132 SMART rrm1_1 34 107 IPR000504 GO:0003723
Bva04g02385 132 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 104 IPR000504 GO:0003723
Bva04g02385 132 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 111 IPR000504 GO:0003723
Bva04g02385 132 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL-LIKE 1 131 - -
Bva04g02385 132 SUPERFAMILY RNA-binding domain, RBD 33 124 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02385 Bva-Chr4 22085976 22087688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02385 35 113 Eukaryotic Initiation Factors Gene Family AT2G23350 31.646 4.85e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02385 - - jre:109002136 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02385 04 22085976 22087688 Bva04g02385 04 22085976 22087688 ECH