Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02377 ATGGGACGCGTCCGCACAAAGACAGTGAAGAAATCGTCTCGGCAAGTGATTGAGAGGTACTACTCTCGTATGACATTGGATTTCCACACCAACAAGAAGATCCTCGAAGAGGTGGCTTTGATTCCTTCCAAGAGGCTTCGGAACAAGATCGCAGGTTTTTCGACTCACCTTATGAAAAGGATCCAGAAGGGCTCTGTTCGTGGCATCTCCCTGAAGCTGCAGGAGGAGGAGCGCGAACGGCGCATGGATTTCGTACCTGATGTCTCAGCGATTCAGACCGAGCAGATTGAAGTTGACAAGGAGACGCTTGATATGCTCAGCGCTCTTGGAATGTCTGAAATTCCCGGGGTTGTTCAAGTTGACCCGACACCTGTGCAGCCGCAGCTTGGATTTGGCCGTGGTAGGAGGTACTA 413 0.5133 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGSVRGISLKLQEEERERRMDFVPDVSAIQTEQIEVDKETLDMLSALGMSEIPGVVQVDPTPVQPQLGFGRGRRY 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02377 137 PANTHER 40S RIBOSOMAL PROTEIN S17 1 135 - -
Bva04g02377 137 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Bva04g02377 137 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bva04g02377 137 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bva04g02377 137 PANTHER 40S RIBOSOMAL PROTEIN S17 1 135 IPR001210 GO:0003735|GO:0005840|GO:0006412
Bva04g02377 137 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Bva04g02377 137 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02377 Bva-Chr4 22040560 22041331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02377 1 135 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 80.882 9.29e-77 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02377 K02962 - gmx:100785402 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02377 04 22040560 22041331 Bva04g02377 04 22040560 22041331 ECH