Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02352 ATGGGGATGCCACAGGCAATGGATTGCTTGAGGGACAGAGCCACGTTCGTAAAGGATTCACTGCTTAAGAGCCAGACCATTACCGACAACATGGTCGCCATTCTTGGTTCTTTCGATCACCGCCTCTCTGCTCTAGAGACTGCAATGCGTCCAACTCAAATAAAAACGCATTCGATTCGAAGAGCTCATGATAATATTGATAAGGCACTGGCTTCTGCAGAGATAATTCTGTCGCAATTCGACCAGACCCGCAAGGCAGAGGCTAAAATACTAAGAGGGCCACATGAGGATCTTGAAAGCTACCTTGAAGCAATTGATCAGTTGAGAGCCAATGTCGACTTCTTCAGCAGcagaaagaattttaaaagtagTGAAGGTATTATTAACCACGCTAACAATTTGCTTGCTAAAGCTATCTCGAAGCTGGAAGATGAGTTCCGACATCTCTTGACAAATTACAGCAAGCCTGTGGAACCTGATCGCCTTTTTGACTGCCTACCAAACTCACTTCGGCCTTCAGCTGCTGGGCAGCAAGGCGAAGGTGGTGGCAAAACCGAAGGCCAAAAACAAAGCCTGGAAACTGCCATTTTTAAAGCTCCAACCCTTATTCCACCCAGAGTTCTGCCTTTGCTACATGATTTGGCAAACCAAATGGTTGAAGCTGGTCATCAACAACAGTTATTTCGTATCTACAGGGATACTCGTGCTGCAGTTCTGGAGCAGAGTCTTAGGAAGTTAGGTGTAGAGAGACTGAGCAAAGATGATGTCCAGAAAATGCAGTGGGAGGTTTTGGAGGCGAAGATTGGGAACTGGATTCATTACGTGCGAATTGCTGTCAAATTGCTGTTTGCTGGGGAAAAAGCAATCTGCGATCAAATATTTGCTGGTGTTGATTCTTTGAGAAGTCAATGTTTTGCTGAAGTCTCTGCCAACAGTGTAGCTATGCTCCTTAGTTTTGGAGAGGCCATTGCTAGAAGCAAGAGATCACCTGAAAAACTATTTGTTCTTTTAGATATGTATGAGATAATGAGAGAAGTTAAGCCAGAGATTGAGACAACTTTTGAAGATAAAGCTTGCACGGAAATGAGGGAAGCAGCATTAAGCTTGGCAAAGCGACTAGCTCAGACAGCCCAAGAAACCTTTTGTGACTTCGAGGAAGCAGTCGAAAAAGATGCCACTAAAACTACCGTGCTTGATGGAACTGTCCATCctctaactagctatgtgatcaattatgtgaaatttttatacGATtatcaatcaactttgaaactactttTTCAAGAGTTTGATGCCAGTGATACAGATGCTCAGTTAGCAGCTGTAACTACAAGAATTATGCAGGCTCTCCAAAATAACCTGGATGGAAAATCAAAACAGTATAAAGATCCTGCATTAACCCAGTTATTTCTTATGAACAATGTTCACTACATAGTGAGATCAGTGAGAAGGTCAGAAGCAAAGGATTTGTTAGGGGATGACTGGGTGCAAATACACAGAAGAATTGTGCAGCAGCATGCAAATCAGTATAAAAGGATCTCTTGGGCAAagATTCTGCAATGCCTCACCGTGCAAGGAGCTAATTCATCTGGTGGTGATAGCAGTGGACTTTCAAGAGCGGCGATTAAAGATAGGTACAAAACCTTCAACATTCAATTTGAGGAACTTCATCAAAGACAATCTCAGTGGACGGTTCCTGACAGCGAGTTGCGCGAATCTCTAAGGCTGGCTGTTGCTGAAGTTCTTTTGCCTGCCTATAGATCTTTCATTAAACGTTTTGGGCCTATGATTGAGAATGGCAAAAATCCTACCAAGTATATTAGATATACTCCGGAGGATCTTGAACGAATGTTGGGCGAATTTTTCGAGAGCAAGACATGGAATGAACAAAGGCGGTG 1898 0.4173 MGMPQAMDCLRDRATFVKDSLLKSQTITDNMVAILGSFDHRLSALETAMRPTQIKTHSIRRAHDNIDKALASAEIILSQFDQTRKAEAKILRGPHEDLESYLEAIDQLRANVDFFSSRKNFKSSEGIINHANNLLAKAISKLEDEFRHLLTNYSKPVEPDRLFDCLPNSLRPSAAGQQGEGGGKTEGQKQSLETAIFKAPTLIPPRVLPLLHDLANQMVEAGHQQQLFRIYRDTRAAVLEQSLRKLGVERLSKDDVQKMQWEVLEAKIGNWIHYVRIAVKLLFAGEKAICDQIFAGVDSLRSQCFAEVSANSVAMLLSFGEAIARSKRSPEKLFVLLDMYEIMREVKPEIETTFEDKACTEMREAALSLAKRLAQTAQETFCDFEEAVEKDATKTTVLDGTVHPLTSYVINYVKFLYDYQSTLKLLFQEFDASDTDAQLAAVTTRIMQALQNNLDGKSKQYKDPALTQLFLMNNVHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQGANSSGGDSSGLSRAAIKDRYKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENGKNPTKYIRYTPEDLERMLGEFFESKTWNEQRR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02352 632 Gene3D Exocyst complex component Exo70 74 632 - -
Bva04g02352 632 SUPERFAMILY Cullin repeat-like 76 623 IPR016159 -
Bva04g02352 632 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 629 - -
Bva04g02352 632 Coils Coil 98 118 - -
Bva04g02352 632 Pfam Exo70 exocyst complex subunit 270 619 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bva04g02352 632 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 629 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02352 Bva-Chr4 21919238 21924999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02352 1 632 EXO70 exocyst subunit family AT5G52340 79.430 0.0 1051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02352 K07195 - gmx:100779774 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02352 04 21919238 21924999 Bva04g02352 04 21919238 21924999 ECH