Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02346 ATGAACATTCCTGCACCCGCCATGGAAAACCGTCTTCTCAAGCTTATGTTCGCGCTCATTTTGTCACTTGCTCCAGTTGTTCAGAGTGTCACAGACCCTAGTGATGCTGATATTCTTCGCCAATTCAGAAAAGGACTGAGCAACCCGGAGCTGTTGCCGTGGCCTGATACTGGCGGAGACCCCTGTGGCAAACCTAATTGGCAGTATATCTTCTGCAAGGGAAACAGAGTTTCCCAGATTCAGGCTAAgaacttgaacttgaaagGTCGTCTACCCCAGAATTTCAACCAGCTCTCCGGGCTATTTAACATTGGCCTTCAGAACAATAAACTGAACGGGCCATTACCGTCTTTCAGCGGCTTAtccaatttgaaatatgcATATTTGGATAACAACGAGTTCGATTCCATTCCGGCTGATTTCTTTGATGGGCTTCAGAGTCTAGAGGTTTTGGCATTGGatgacaataattttaatgctAGCACTGGATGGAAATTTCCACCTAAATTGAAGGATTCCACTCAGTTAAGGAATCTTTCTTGTATGAATTGCAACATAGCTGGTCCTCTGCCGGATTTTATGGTGAAGATGTCGTCTCTAACAGCCCTGAAGCTTTCAGGCAACAGTTTAACCGGTGAAATTCCACAAACTTTCAATGGCACGAATTTGCAAATTCTATGGTTGAATAATCAGAAGGGTGGCGGTCTCACGGGTCCTATTGACATTGTGACAACGATGACTTCGCTTACGAGTGTCTGGCTTCATGGGAACCATTTCACAGGGTCCATTCCAGAGAACATTGGGAGTTTAACTCTTCTTAAGGATCTCAATCTCAATGGTAATGAACTCGTTGGCTTAATCCCAAAAGCTTTAGCTGATATGCAATTGGACCATCTAGATTTGAACAATAACAACCTAATGGGTCCGATCCCAGATTTCAAAGCAGCTAAAGTCGTTTATCAGACGAATGCTTTTTGTCAATCCAAGCCGGGGACTCCTTGTGCCCCAGAAGTCACAGCACTCCTGGAATTTCTTGGAGGGTTGAAGTATCCTTTGAATTTAGTTCGAGCTTGGTCTGGTAATGACCCATGTGCGGGGCAGTGGTTGGGAATAAAGTGCAATTCCAATGGAAAGGTGTCCATGATTATTTTGCCAAAGTTTAATCTTTCTGGTAACTTGAGTCCTTCTGTTGCAAAGTTGGATTCTTTAGTTCAAATCAGGTTAGCAGGTAATAATCTGAGCGGCCAAATACCTAGTAACTGGACTGGCTTGAAATCTATGACATTATTGGATCTAAGTGGCAATAACATTTCCCCTCCATTGCCAAAGTTTAGCAATAGCAATTTCAAACTTCTAACTGATGGAAATCCTCTGTTGAATGGTGATCTGAAAGGCCCTTCATCAGGGAACAGCCCATCATCTGAGAATGGCCAACCTTCACCCGATACTCCTGCAGAACACTCAGATTCCATATCCAATAATACTcttgaacaagaaaaatacaaaaggaaAACTTTGGTTGCAATTGTAGCCCCCATTGTAGGTGTTGTTGCTGCAACTTTTTTGCTCATTCCCCTTTGTATATATTGTCGCAAGGGAAGAAAAGATGTACCCCAAGCTCCAAGTTCACTAGTAATTCACCCAAGAGATCCATCTGATGCAGACAATATGTTAAAGATTGCTTTTGCTAACAATATCAATGGAAGTATTTCTACAGTAACTGGTAGTGGTTCTGGAAGCATAAATAGTGGCGGATTTGGCGAATCTCATGTCGTTGAAGCTGGAAATCTTGTGATATCAGTTCAAATCCTTCGAAAtgtgacaaataatttttctcccGAGAATGAGCTTGGCCGTGGTGGATTTGGGGTCGTTTACAAGGGAGAATTGGATGATGGAACTAAAATAGCAGTAAAAAGAATGGAATCTGGTGTGATTAGAACTAAAGCCTTGGACGAATTCCAGGCTGAAATTGCAGTTTTATCAAAAGTCAGACACCGCCACCTAGTGTCTCTTTTGGGTTATTCTATCGAAGGTAATGAGAAAGTCCTAGTTTATGAGTATATGCCACAAGGGGCTCTCAGTAAACATCTTTTTCACTGGAAGCACCTAAAACTGGAACCTCTTTCTTGGAAGAGGAGGCTCAATATTGCCTTGGATGTAGCTAGAGGAATGGAGTATCTGCATAGCCTGGCTCATCAGAGCTTCATACACAGAGATCTTAAGCCATCAAATATTTTGCTTGGGGATGACTTTAGAGCAAAAGTCTCAGACTTTGGATTGGTGAAACTTGCACCTGATGGTGAAAAATCTGTAGTGACCCGGCTAGCTGGGACTTTTGGATACTTGGCGCCTGAGTATGCTGTGACAGGAAAAATCACAACCAAAGTGGACGTTTTCAGTTTTGGGGTTGTTCTAATGGAGCTGCTGACTGGATTGATGGCCCTTGATGATAATAGACCTGAGGAAAGCCAATACCTGGTGGCATGGTTTTGGCATATAAAATCTGACAAGGAGAAACTTATGGCTGCTATTGACCCAGCCCTTGACAGAAAGGAAGAAACGTTTGAAACCATCTCCGTCATTGCTGAGCTAGCTGGGCACTGCACTGCAAGAGAACCATGCCAACGGCCAGATATGGGTCACGCTGTAAATATTCTGGCTCCACTTGTTGAAAAATGGAAACCATTTGATGATGACTCAGAGGAGTATTCTGGCATTGACTACAATCTACCCCTTACCCAGATGGTGAAGGGATGGCAGGCAGGAAAGGACTTAAGCTACATGGACCTAGATGACAGTAAGGGTAGCATCCCATCAAGGCCTACTGGATTTGCCACGTCTTTTACTACTATAGATGGTCGGTG 2867 0.4217 MNIPAPAMENRLLKLMFALILSLAPVVQSVTDPSDADILRQFRKGLSNPELLPWPDTGGDPCGKPNWQYIFCKGNRVSQIQAKNLNLKGRLPQNFNQLSGLFNIGLQNNKLNGPLPSFSGLSNLKYAYLDNNEFDSIPADFFDGLQSLEVLALDDNNFNASTGWKFPPKLKDSTQLRNLSCMNCNIAGPLPDFMVKMSSLTALKLSGNSLTGEIPQTFNGTNLQILWLNNQKGGGLTGPIDIVTTMTSLTSVWLHGNHFTGSIPENIGSLTLLKDLNLNGNELVGLIPKALADMQLDHLDLNNNNLMGPIPDFKAAKVVYQTNAFCQSKPGTPCAPEVTALLEFLGGLKYPLNLVRAWSGNDPCAGQWLGIKCNSNGKVSMIILPKFNLSGNLSPSVAKLDSLVQIRLAGNNLSGQIPSNWTGLKSMTLLDLSGNNISPPLPKFSNSNFKLLTDGNPLLNGDLKGPSSGNSPSSENGQPSPDTPAEHSDSISNNTLEQEKYKRKTLVAIVAPIVGVVAATFLLIPLCIYCRKGRKDVPQAPSSLVIHPRDPSDADNMLKIAFANNINGSISTVTGSGSGSINSGGFGESHVVEAGNLVISVQILRNVTNNFSPENELGRGGFGVVYKGELDDGTKIAVKRMESGVIRTKALDEFQAEIAVLSKVRHRHLVSLLGYSIEGNEKVLVYEYMPQGALSKHLFHWKHLKLEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKPSNILLGDDFRAKVSDFGLVKLAPDGEKSVVTRLAGTFGYLAPEYAVTGKITTKVDVFSFGVVLMELLTGLMALDDNRPEESQYLVAWFWHIKSDKEKLMAAIDPALDRKEETFETISVIAELAGHCTAREPCQRPDMGHAVNILAPLVEKWKPFDDDSEEYSGIDYNLPLTQMVKGWQAGKDLSYMDLDDSKGSIPSRPTGFATSFTTIDGR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02346 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Bva04g02346 955 Gene3D Ribonuclease Inhibitor 32 332 IPR032675 -
Bva04g02346 955 PANTHER OSJNBA0070M12.3 PROTEIN 12 955 - -
Bva04g02346 955 Gene3D Transferase(Phosphotransferase) domain 1 689 907 - -
Bva04g02346 955 SMART serkin_6 611 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02346 955 ProSitePatterns Protein kinases ATP-binding region signature. 617 639 IPR017441 GO:0005524
Bva04g02346 955 Gene3D Ribonuclease Inhibitor 336 461 IPR032675 -
Bva04g02346 955 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Bva04g02346 955 Pfam Leucine rich repeat N-terminal domain 336 374 IPR013210 -
Bva04g02346 955 SUPERFAMILY L domain-like 335 449 - -
Bva04g02346 955 MobiDBLite consensus disorder prediction 463 491 - -
Bva04g02346 955 Gene3D Phosphorylase Kinase; domain 1 580 688 - -
Bva04g02346 955 Pfam Leucine rich repeat 248 306 IPR001611 GO:0005515
Bva04g02346 955 ProSiteProfiles Protein kinase domain profile. 611 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02346 955 MobiDBLite consensus disorder prediction 460 491 - -
Bva04g02346 955 SMART LRR_typ_2 246 269 IPR003591 -
Bva04g02346 955 SMART LRR_typ_2 424 448 IPR003591 -
Bva04g02346 955 SMART LRR_typ_2 121 144 IPR003591 -
Bva04g02346 955 SMART LRR_typ_2 197 220 IPR003591 -
Bva04g02346 955 SMART LRR_typ_2 270 293 IPR003591 -
Bva04g02346 955 Pfam Protein tyrosine and serine/threonine kinase 614 885 IPR001245 GO:0004672|GO:0006468
Bva04g02346 955 SUPERFAMILY L domain-like 31 314 - -
Bva04g02346 955 SUPERFAMILY Protein kinase-like (PK-like) 591 887 IPR011009 -
Bva04g02346 955 CDD STKc_IRAK 617 890 - -
Bva04g02346 955 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 12 955 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02346 Bva-Chr4 21899139 21903055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02346 96 918 Receptor kinase-like Gene Family AT1G55610 30.581 5.72e-82 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bva04g02346 PK_Tyr_Ser-Thr 9.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02346 - - zju:107433627 1365.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02346 04 21899139 21903055 Bva04g02346 04 21899139 21903055 ECH