Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva04g02328 | ATGAACAACACAACAGATACTGCTGGTGGGTTCCTTGGCTCTAACAATATCAGTGGCTTAGGCTACGGAATAGGAGTTTCGGTTGGAATTCTCCTGCTCATTACAACTATCACCCTCACCTCCTACTTCTGCACCCGCACACAGGCACCGACAGCCCCAGCAGCGACTCGGAGAAATGCCCCCAGTTTCCTTGAACCACAACACTCTGTAATCCATGTGGGGCTAGATGAAGCTACAATTCTGAGTTATCCAAAGCTGCGCTACTCTGAAGCCCAGATTCAAAAGTCAGATTCCACATCTACATGCTGCTCCATTTGCCTGCGAGATTACAAGAACACCGATATGCTTCGCCAACTTCCTGATTGTGGACACCTCTTCCATATCAAGTGCATAGACCCATGGTTGAGACTCAATCCCTCTTGTCCACTATGCAGAACGTCTCCAATGCCAACACCACTCTCAACTCCTCTCGCCGAAGTGGTTCCATTAGCAAGGAGGCGAGATTA | 506 | 0.4901 | MNNTTDTAGGFLGSNNISGLGYGIGVSVGILLLITTITLTSYFCTRTQAPTAPAATRRNAPSFLEPQHSVIHVGLDEATILSYPKLRYSEAQIQKSDSTSTCCSICLRDYKNTDMLRQLPDCGHLFHIKCIDPWLRLNPSCPLCRTSPMPTPLSTPLAEVVPLARRRD | 168 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva04g02328 | 168 | ProSiteProfiles | Zinc finger RING-type profile. | 103 | 145 | IPR001841 | - | |
Bva04g02328 | 168 | Pfam | Ring finger domain | 103 | 145 | IPR001841 | - | |
Bva04g02328 | 168 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 63 | 150 | IPR013083 | - | |
Bva04g02328 | 168 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 168 | IPR045899 | - | |
Bva04g02328 | 168 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN-RELATED | 1 | 168 | - | - | |
Bva04g02328 | 168 | SMART | ring_2 | 103 | 144 | IPR001841 | - | |
Bva04g02328 | 168 | CDD | RING-H2_PA-TM-RING | 102 | 145 | - | - | |
Bva04g02328 | 168 | SUPERFAMILY | RING/U-box | 86 | 150 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva04g02328 | Bva-Chr4 | 21783517 | 21784247 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva04g02328 | 10 | 164 | C3H Transcription Factor Family | AT2G35910 | 63.291 | 4.68e-57 | 176 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva04g02328 | - | - | gmx:100811799 | 249.98 |