Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02318 ATGGGGAATAACTGTGTCGGATCGAGAACTTCCACAGATAgattttctctctcaattCCAAGTTCATTTTGGTGGCCACGACCAACAGCAACTCTAGTTTCTCACACCCGCCAAGGAATTGCTGCTGTATCCACATCTGTGagcaaagaccaaaatgctcCAATGGCTGTTCAGAATAAGCCTCCAGAAGTAATGACAATTAGTAAGGAGAACGATAAACCTTTTCAGGCCACACGATATAAAGATGAGAAGGAGGCAGCTGAACCAAAGAAACAGGAAAAAGAGACTGAATCTTCAGAAACAAGGGACGAGGAGGGAACTAGATTACCAGAACCAATTTGGGATAAGGAAATGGCTAGGCCAGCTCCAAGAACAAAGCAGGAGAATAGACCAGCAGTGCCTGCAAAACCAAAGTTGACCCATAATTTCAAGAGGCTAGCAACTGCTGGGCTTCAAGCAGAGTCAGTTTTGCAAACAAAAACTGGTCATCTTAAGGAGTATTATAATTTGGGAAAGAAGCTTGGAAATGGTCAATTTGGAACCATATTCCTCTGTGTGGAGAAAGAAACTGGCAAACAATATGCTTGCAAGTCCATTGCGAAGCGAAAATTGCTTACAGATGATGATGTGGAGGATGTTAGAAGGGAGATTCAGATAATGCATCACTTGTCTGGGAGTCAGGATGTGATCTCAATAAAAGGGGCTTATGAGGATCCTGTTGCAGTTCATCTTGTGATGGAATTATGTTCTGGGGGCGAGCTCTTCGACAGGATCGTGGAACGGGGGCGTTATACAGAAAGGAAGGCAGCTAAACTTGCAAGGACTATAGTTAGTGTTATTGAAGCTTGCCATTCTCTTGGAGTAATGCATCGCGATCTTAAGCctgagaattttctttttgttaatgaGGAGGAAGACTCACCCCTAAAGGCCATAGACTTTGGATTGTCTGTATTCTTCAAACCAGGAGAGATTTTCACTGATGTCGTGGGAAGTCCTTATTATGTTGCACCTGAAGTTCTGCGCAAGAGATATGGTCCAGAAGCAGATGTCTGGAGTGCTGGTGTGATTATCTACATTCTCTTACGCGGGGTGCCTCCTTTTTGGGGTGAATCGGAGAAAGAGATATTTCGGGAGGTTTTACATGGTGATCTTGATTTCTCAGCAGATCCCTGGCCTAATATCTCAGAAGATGCAAAAGACTTGGTTAGGAAGATGCTTGTTAGGGATCCTAAACAACGGATAACAGCCCATGAAGTCCTTTGTCATCCTTGGATTCAGGTTGATGCTGTAGCTCCTGACAGGCCTCTTGATTCTGCAGTTCTGAGTCGCCTGAAGCAGTTTTCTGCTATGAACAAGCTGAAGAAAATGGCTCATAGGGTCATTGCAGAAAATCTCTGTGAGGAAGAAATTGCTGGACTGAAAGAAATGTTTAAGATGATCGACACAGACAACAGTGGTCAAATTACTCTTGAGGAACTCAAGATTGGACTTAAAAGATTTGGTGCCAACCTCAATGAATCTGAAATATACGATCTAATGCAAGCAGCAGATGTTGATAACAGTGGAACAATTGATTATGGAGAATTCATAGCAGCAACATTGCATTTAAACAAAGTCGAGAGAGAGGATCATTTATATGCAGCTTTCTCATATTTTGACAGAGATGGAAGTGGCTACATCACTCAAGATGAACTTCAACGAGCCTGTGAGGAATTTGGTATAGAAGATGCCCAATCAGAAGAGATGATCAGAGAAGCTGATCAAAACAATGATGGCAGAATAGATTACAATGAATTTGTGGCTATGATGCAGAGAGGCAATGCAGATATGGGTAAGAAGGGTCCAAAGCCTAGTACTAGTTTTGGCATGGGATTCAGGGAGGCACTATCTGTATGCTA 1901 0.4166 MGNNCVGSRTSTDRFSLSIPSSFWWPRPTATLVSHTRQGIAAVSTSVSKDQNAPMAVQNKPPEVMTISKENDKPFQATRYKDEKEAAEPKKQEKETESSETRDEEGTRLPEPIWDKEMARPAPRTKQENRPAVPAKPKLTHNFKRLATAGLQAESVLQTKTGHLKEYYNLGKKLGNGQFGTIFLCVEKETGKQYACKSIAKRKLLTDDDVEDVRREIQIMHHLSGSQDVISIKGAYEDPVAVHLVMELCSGGELFDRIVERGRYTERKAAKLARTIVSVIEACHSLGVMHRDLKPENFLFVNEEEDSPLKAIDFGLSVFFKPGEIFTDVVGSPYYVAPEVLRKRYGPEADVWSAGVIIYILLRGVPPFWGESEKEIFREVLHGDLDFSADPWPNISEDAKDLVRKMLVRDPKQRITAHEVLCHPWIQVDAVAPDRPLDSAVLSRLKQFSAMNKLKKMAHRVIAENLCEEEIAGLKEMFKMIDTDNSGQITLEELKIGLKRFGANLNESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKVEREDHLYAAFSYFDRDGSGYITQDELQRACEEFGIEDAQSEEMIREADQNNDGRIDYNEFVAMMQRGNADMGKKGPKPSTSFGMGFREALSVC 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02318 633 MobiDBLite consensus disorder prediction 44 134 - -
Bva04g02318 633 ProSiteProfiles EF-hand calcium-binding domain profile. 541 576 IPR002048 GO:0005509
Bva04g02318 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 288 300 IPR008271 GO:0004672|GO:0006468
Bva04g02318 633 ProSitePatterns EF-hand calcium-binding domain. 518 530 IPR018247 -
Bva04g02318 633 Gene3D Phosphorylase Kinase; domain 1 170 253 - -
Bva04g02318 633 PANTHER SERINE/THREONINE-PROTEIN KINASE 101 615 - -
Bva04g02318 633 ProSiteProfiles EF-hand calcium-binding domain profile. 505 540 IPR002048 GO:0005509
Bva04g02318 633 ProSitePatterns EF-hand calcium-binding domain. 588 600 IPR018247 -
Bva04g02318 633 ProSiteProfiles EF-hand calcium-binding domain profile. 469 504 IPR002048 GO:0005509
Bva04g02318 633 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 101 615 - -
Bva04g02318 633 ProSiteProfiles EF-hand calcium-binding domain profile. 577 610 IPR002048 GO:0005509
Bva04g02318 633 ProSitePatterns EF-hand calcium-binding domain. 482 494 IPR018247 -
Bva04g02318 633 CDD STKc_CAMK 168 425 - -
Bva04g02318 633 SMART efh_1 579 607 IPR002048 GO:0005509
Bva04g02318 633 SMART efh_1 473 501 IPR002048 GO:0005509
Bva04g02318 633 SMART efh_1 509 537 IPR002048 GO:0005509
Bva04g02318 633 SMART efh_1 545 573 IPR002048 GO:0005509
Bva04g02318 633 Gene3D Transferase(Phosphotransferase) domain 1 254 432 - -
Bva04g02318 633 ProSiteProfiles Protein kinase domain profile. 168 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02318 633 MobiDBLite consensus disorder prediction 74 124 - -
Bva04g02318 633 Pfam Protein kinase domain 168 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02318 633 SUPERFAMILY Protein kinase-like (PK-like) 166 427 IPR011009 -
Bva04g02318 633 CDD EFh 548 605 IPR002048 GO:0005509
Bva04g02318 633 SUPERFAMILY EF-hand 466 606 IPR011992 -
Bva04g02318 633 Pfam EF-hand domain pair 474 534 IPR002048 GO:0005509
Bva04g02318 633 Pfam EF-hand domain pair 544 605 IPR002048 GO:0005509
Bva04g02318 633 ProSitePatterns EF-hand calcium-binding domain. 554 566 IPR018247 -
Bva04g02318 633 ProSitePatterns Protein kinases ATP-binding region signature. 174 201 IPR017441 GO:0005524
Bva04g02318 633 SMART serkin_6 168 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02318 633 Gene3D - 434 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02318 Bva-Chr4 21729832 21733474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02318 1 632 EF-hand Containing Proteins AT3G10660 65.850 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva04g02318 Pkinase 9.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02318 K13412 - mnt:21399916 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02241 13 17308498 17312865 Bva04g02318 04 21729832 21733474 BWGD