Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02310 ATGGGCAATAATTGTGTAGGACCCAACCTTAGTGGGCAAGGATTTCTTCAATCTGTAACGGCGGCTGTTTGGAAAAACCGGCCACCGGAAGACAGGCTTCCTCCGCCTAATGGCACGGAAAAAGCAAATGCAGGCCCCGATTCCTCTAAAGTTTCGAGTGCGGCGAATCAAAATACACCACCTGAAACGGTGAAGATTACCAATACCGAAGTGAATCAATCGCCACAGCCTGAAAAGCCTGTTAAGGCAGAACAGGGACCTGGAAAGCCCGTTGATCAAGCCTCTAATAACCCTGATGCCGAGAAACCTAAGAAACCTGCTCATGTTAAAAGGGTATCGAGTGTCGGACTTCAATTAGAATCGGTGTTAGGAAGGAAAACTGGGAGTATTAAGGAAGTTTATAGTTTGGGGCGCAAGCTTGGACAAGGGCAATTTGGAACAACGTTTCTTTGTGTAGAGAAGGCAACTGGAAAAGAGTTCGCTTGTAAATCGATTGCCAAGAGGAAATTGATCACGCAAGAAGATGTGGAAGATGTCAGAAGGGAAATTCAGATAATGCATCACTTGGCAGGTCACCCCAATGTGATACAAATAATTGGTGCTTATGAGGATGCTGTTGCTGTCCATGTTGTTATGGAGCTTTGTGCTGGTGGGGAGCTTTTTGACAGGATCATACAGAGGGGCCATTACACTGAGAGAAAGGCAGCTGATCTTGCAAGGTTGATAGTTGGCGTTGTTGAGACATTCCATTCTTTAGGTGTCATGCATCGGGACTTGAAGCCGGAGAATTTTCTGTTTATCAGCCAAGAAGAAGAATCGGCTCTTAAAACAATCGATTTTGGTCTCTCAATGTACTTTAGACCAGGTGAAACATTTACCGATGTAGTTGGGAGCCCATACTATGTGGCCCCTGAAGTTTTGCGGAAGCACTATGGTGCAGAATGTGATGTTTGGAGTGCTGGCGTAATCATTTACATTTTACTCTGCGGAGTACCCCCGTTTTGGGATGAAACTGAACAGGGAATATTTGAGCAAGTCTTAAAAGGAGAACTAGACTTTATCTCTGAACCATGGCCTAGCATATCTGAAGGTGCAAAGGATCTTGTTAGAAGAATGCTTGTAAGGGATCCAAAGAAGCGGCTGTCAGCACATGAAGTTCTTTCCCACCCTTGGGTTCAGGTTAATGGTCTTGCTCCTGATAAGCCTCTTGATTCTGCTGTCATATATCGTTTAAAGCAATTCTCTGCCATGAACAAGCTTAAAAAGATTGCTATCCGAATAATTGCTGAAAATCTGTCTGAGGATGAAATTGCAGGTCTAAAGGAAATGTTCAAGATGATAGACGTAGATAATAGTGGACAGATCACTCTTGAGGAACTGAAAGATGGTTTAGAGAGAATAGGTGCTGATCTAAAGGATTCCGAAATCAATTCATTAATGAAAGCTGCAGACGTTGATAATAGTGGTTCCATAGACTATGGTGAATTCATAGCAGCTATGCTTCATTTAAACAAGATCCAGAAGGAGGATCATCTATTTGCAGCCTTCAATTACTTTGACAAAGATGGGAGTGGGTACATTACAAGAGATGAAATCCAACAAGCCTGTGAAAAGTTTGGTATAGAAGATGTTTATCTAGACGATATAATACGTGAAGTTGACCGGGATAATGATGGACGAATTGATTACAGTGAGTTTGTGGCAATGATGCAAGACACTGGTTTTAGATTGTA 1733 0.427 MGNNCVGPNLSGQGFLQSVTAAVWKNRPPEDRLPPPNGTEKANAGPDSSKVSSAANQNTPPETVKITNTEVNQSPQPEKPVKAEQGPGKPVDQASNNPDAEKPKKPAHVKRVSSVGLQLESVLGRKTGSIKEVYSLGRKLGQGQFGTTFLCVEKATGKEFACKSIAKRKLITQEDVEDVRREIQIMHHLAGHPNVIQIIGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAADLARLIVGVVETFHSLGVMHRDLKPENFLFISQEEESALKTIDFGLSMYFRPGETFTDVVGSPYYVAPEVLRKHYGAECDVWSAGVIIYILLCGVPPFWDETEQGIFEQVLKGELDFISEPWPSISEGAKDLVRRMLVRDPKKRLSAHEVLSHPWVQVNGLAPDKPLDSAVIYRLKQFSAMNKLKKIAIRIIAENLSEDEIAGLKEMFKMIDVDNSGQITLEELKDGLERIGADLKDSEINSLMKAADVDNSGSIDYGEFIAAMLHLNKIQKEDHLFAAFNYFDKDGSGYITRDEIQQACEKFGIEDVYLDDIIREVDRDNDGRIDYSEFVAMMQDTGFRL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02310 577 SMART efh_1 439 467 IPR002048 GO:0005509
Bva04g02310 577 SMART efh_1 545 573 IPR002048 GO:0005509
Bva04g02310 577 SMART efh_1 475 503 IPR002048 GO:0005509
Bva04g02310 577 SMART efh_1 511 539 IPR002048 GO:0005509
Bva04g02310 577 Gene3D Transferase(Phosphotransferase) domain 1 220 397 - -
Bva04g02310 577 ProSiteProfiles EF-hand calcium-binding domain profile. 435 470 IPR002048 GO:0005509
Bva04g02310 577 Pfam EF-hand domain pair 440 500 IPR002048 GO:0005509
Bva04g02310 577 Pfam EF-hand domain pair 510 571 IPR002048 GO:0005509
Bva04g02310 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Bva04g02310 577 ProSitePatterns EF-hand calcium-binding domain. 484 496 IPR018247 -
Bva04g02310 577 Coils Coil 457 477 - -
Bva04g02310 577 MobiDBLite consensus disorder prediction 42 79 - -
Bva04g02310 577 ProSiteProfiles EF-hand calcium-binding domain profile. 546 576 IPR002048 GO:0005509
Bva04g02310 577 Gene3D Phosphorylase Kinase; domain 1 136 219 - -
Bva04g02310 577 ProSitePatterns Protein kinases ATP-binding region signature. 140 167 IPR017441 GO:0005524
Bva04g02310 577 SMART serkin_6 134 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02310 577 Pfam Protein kinase domain 134 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02310 577 PANTHER SERINE/THREONINE-PROTEIN KINASE 75 573 - -
Bva04g02310 577 ProSiteProfiles EF-hand calcium-binding domain profile. 471 506 IPR002048 GO:0005509
Bva04g02310 577 ProSitePatterns EF-hand calcium-binding domain. 448 460 IPR018247 -
Bva04g02310 577 ProSiteProfiles EF-hand calcium-binding domain profile. 507 542 IPR002048 GO:0005509
Bva04g02310 577 MobiDBLite consensus disorder prediction 21 113 - -
Bva04g02310 577 ProSitePatterns EF-hand calcium-binding domain. 554 566 IPR018247 -
Bva04g02310 577 Gene3D - 399 573 - -
Bva04g02310 577 ProSitePatterns EF-hand calcium-binding domain. 520 532 IPR018247 -
Bva04g02310 577 ProSiteProfiles Protein kinase domain profile. 134 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02310 577 SUPERFAMILY Protein kinase-like (PK-like) 134 393 IPR011009 -
Bva04g02310 577 SUPERFAMILY EF-hand 431 571 IPR011992 -
Bva04g02310 577 CDD STKc_CAMK 133 391 - -
Bva04g02310 577 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 75 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02310 Bva-Chr4 21682868 21688677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02310 1 575 EF-hand Containing Proteins AT2G38910 72.449 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva04g02310 Pkinase 1.6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02310 K13412 - zju:107433607 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02310 04 21682868 21688677 Bva04g02310 04 21682868 21688677 ECH