Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02297 ATGGATGCAGGAGCAGTGGCGAGTGCAGATCCAACCCAACCTGCCGTGGAAGTGAAGCTCTTCAACAGGTGGAGCTTCGATGATGTTCAGGTTAATGACATTTCTCTGGCTGACTATATTGGAGTGGTGCCATCCAAGCATGCAACTTATGTTCCCCATACTGCTGGTAGGTACTCAGTCAAGCGATTTAGAAAGGCCCAGTGTCCAATAGTTGAGAGGCTTACCAACTCTCTGATGATGCACGGTAGAAACAATGGGAAGAAACTGATGGCTGTGAGAATTATCAAACATGCTATGgaaattattcatttgttgACTGAGCTGAATCCCCTTCAAGTTATAATTGATGCTGTGATTAACAGTGGTCCTCGTGAAGATGCAACTCGAATTGGTTCAGCTGGTGTTGTTAGGAGACAGGCTGTTGATATTTCACCCCTTCGTCGTGTGAATCAGGCCATCTATCTTCTAACAACGGGTGCACGCGAAGCTGCTTTCAGAAATATTAAGACAATTGCTGAATGCTTGGCTGATGAACTTATTAATGCGGCAAAAGGTTCATCGAACagCTACGCTATCAAGAAAAAGGATGAGATCGAGAGAGTTGCCAAGGCCAATCGTTA 620 0.4403 MDAGAVASADPTQPAVEVKLFNRWSFDDVQVNDISLADYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTELNPLQVIIDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02297 206 ProSitePatterns Ribosomal protein S7 signature. 72 98 IPR020606 GO:0003723|GO:0003735|GO:0006412
Bva04g02297 206 Gene3D Ribosomal protein S7 domain 2 206 IPR036823 -
Bva04g02297 206 Pfam Ribosomal protein S7p/S5e 60 206 IPR023798 -
Bva04g02297 206 SUPERFAMILY Ribosomal protein S7 19 206 IPR036823 -
Bva04g02297 206 CDD uS7_Eukaryote 19 206 IPR005716 GO:0003735|GO:0006412|GO:0015935
Bva04g02297 206 TIGRFAM uS7_euk_arch: ribosomal protein uS7 17 206 IPR005716 GO:0003735|GO:0006412|GO:0015935
Bva04g02297 206 PANTHER 40S RIBOSOMAL PROTEIN S5 7 206 - -
Bva04g02297 206 PANTHER RIBOSOMAL PROTEIN S7 7 206 IPR000235 GO:0006412
Bva04g02297 206 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 3 206 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02297 Bva-Chr4 21615026 21617701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02297 17 206 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 93.684 1.86e-135 376