Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02292 ATGGCAACGGCAACATACCCACCGCCAACACCCTATTACAGACTCTACAAGGACTACTTACAAGACCCGAAATCAGCTCCTGAGCCTCCCCCTCCCACAGAAGGGACATATGTTTGTTTTGGAGGCAACTACACTaCTGACGATGTGCTGCCAAGCTTGGAAGAGCAGGGAGTGCGCCAGCTATATCCTAAGGGGCCTAATGTTGATTTTAAGAAGGAGCTAAGAGCACTTAATGGAGACTTGCAGCTGCACATTTTGGAACTTGCCGATATCCTCATTGAGAGACCATCACAATATGCGAGGAGAGTGGAAGAAATATCTCTTGTATTCAAGAACTTACACCACCTTCTAAACTCACTGCGCCCTCATcagGCGAGAGCAACATTAATTCACATCCTGGAACTTCAGATACAGCGTCGCAAACAAGCAGTTGAGGACATAAAGagaagaagagaagaagcgCAAAGTCTTCTTAGGGAGTCCCTGGCGACACTAGATGGTCATTA 506 0.4506 MATATYPPPTPYYRLYKDYLQDPKSAPEPPPPTEGTYVCFGGNYTTDDVLPSLEEQGVRQLYPKGPNVDFKKELRALNGDLQLHILELADILIERPSQYARRVEEISLVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQSLLRESLATLDGH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02292 168 Coils Coil 130 164 - -
Bva04g02292 168 Gene3D - 63 159 IPR044888 -
Bva04g02292 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Bva04g02292 168 SUPERFAMILY Mediator hinge subcomplex-like 66 159 IPR037212 GO:0016592
Bva04g02292 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02292 Bva-Chr4 21592556 21595969 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Bva04g02292 Med7 2.5e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02292 K15148 - jre:109003137 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02292 04 21592556 21595969 Bva04g02292 04 21592556 21595969 ECH