Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02277 ATGGACAAGACCACTGAGAGGGAGACCCATAATTTCATGAATGTCGAATCCTTCTCTCAGCTCCCTTTTATCCGCCCTGCACCCGTTAAAGAAAAGGGCATTAGACTTTTCGGCAAAGAATTCGGCAGCGGCGGCGACGCCTCTACCGCTGCCGCCACCGATGAATCCGAGTCCGCCGAGACAACCCCAAACGCTTTCGAAATAGATACCAAAGAGAACACCACCGCCGAGAACGGCGAAAGCAACCGTAGATTCGAATGCCATTACTGCTGCAGAAACTTCCCTACCTCACAAGCCTTAGGTGGCCATCAAAACGCCCATAAACGAGAGCGCCAACACGCAAAACGAGCTCATCTCCAGTCAGCCATGGTGCACAATGGCCTCTCAGAATCCCAAGTCTACGGTTTCATGAACTATAGGCTCGGTTCAACTCCGGCAACACCAATAGCTACATATCCAACATGGAATAGTGCCTCAACTCCCATTAATGGTGGAAGGTTCTATGGAAGCCATGGAATTGGAACCTCGTATTCTCACCATCATCCGCAACAGCAGCCCATCAATGGGAGCCCCTTGGCCTTCTGGCGAATCCCCGCCGTTCAAAGTAACCCTACTTTGATCAACCGTGACCGTTCGTTGCATCCATTGCCATTGTTTGCCGGCGAGGAAATGAACATGAGAACTTCAGAGGTCATTGCAGCTGGCTCTGCGGCTCCTCAAAACCGGTACGTTTATGACTCCAAACCCAGCGTTCAAGACCACGTTAGTTTGGATCTTCATCTGTA 785 0.5096 MDKTTERETHNFMNVESFSQLPFIRPAPVKEKGIRLFGKEFGSGGDASTAAATDESESAETTPNAFEIDTKENTTAENGESNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHNGLSESQVYGFMNYRLGSTPATPIATYPTWNSASTPINGGRFYGSHGIGTSYSHHHPQQQPINGSPLAFWRIPAVQSNPTLINRDRSLHPLPLFAGEEMNMRTSEVIAAGSAAPQNRYVYDSKPSVQDHVSLDLHL 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02277 261 Gene3D Classic Zinc Finger 57 134 - -
Bva04g02277 261 PANTHER ZINC FINGER PROTEIN GIS 1 261 - -
Bva04g02277 261 MobiDBLite consensus disorder prediction 49 72 - -
Bva04g02277 261 SUPERFAMILY beta-beta-alpha zinc fingers 82 113 IPR036236 -
Bva04g02277 261 Pfam C2H2-type zinc finger 84 109 - -
Bva04g02277 261 PANTHER ZINC FINGER PROTEIN GIS 1 261 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Bva04g02277 261 MobiDBLite consensus disorder prediction 40 79 - -
Bva04g02277 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Bva04g02277 261 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02277 Bva-Chr4 21527382 21528308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02277 1 261 C2H2 Transcription Factor Family AT2G41940 41.812 7.08e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02277 - - jre:108982706 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02277 04 21527382 21528308 Bva13g02293 13 17559817 17560753 BWGD
Bva04g02277 04 21527382 21528308 Bva04g02277 04 21527382 21528308 ECH