Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02240 ATGAAGGAGAACAAGATTGATTGGCGTGGAAGGATTCAACAGAGGCATGGGTTAAATGGTGGCTGCAATTCCGAGTTTGGTAATCGTTCTTGTCACTATTATGATATCAAACAGTTGTGGGGTATGGGAATTTGTGGGCAGTCACAGCCACAGGGAATTGCCATGGCTGGAGGAACAGAAGAGCCAAGTTCATACGCAGACCCTGCATCTGCAAAATCATCCGCAGCCATCATGAGCTGTTTTGATTCACCAGCTTCTGCTTTCTATGTAACAGAACGCTGCATGGGGCTTCCACGATATGATTCCCCGGCTGGTAATCCCTCTTTGAGCTCTCAGTTTTCAAAGATTAAAGATTTGGAATTCCCTTTGTATCAATCGCCCAGGGAAAACCTTTTCTTGGATTCAGAAAACCAAGCTGACCCCAACTTGGAACTATCAAACACCTTGCAAGCAATGGtgaaatctcaattgaatggCGATCGATACTGTAAGTCCCCTGAAAAATCCAGTAAAATCCCATGTGGGAATTTTTCTTCAAGCAAGTTTCTTCCCACTGAACAAAACAAGTTGTTCATTGATGAGGCACTCAGGAGGAAATTATCTCTTCCTTTTGAAGGAAATCAGGATCATACTGTTGCTTGTGACTCGTATAGTTTACCTGTTGGGCAGTTGAGCTTTTCTCCTCAGAAAGAGAAGCTATCTCCAACAGTTTCATCAGCAAGTTTGTCAAATGCTTCTGGTAAACCTGCTTCAAATGGGTCAATAGTCTCCAGTAAAACTCGAATAAGATGGACTCAGGCCCTTCACGACAAGTTTGTGGAGTGTGTGAATCGCTTAGGGGGTGCTGAGAAGGCAACTCCCAAAGCTATATTGAAGTTGATGGACTCAGATGGATTGACTATCTTCCATATAAAGAGTCATTTGCAGAAATATAGAATTGCAAAATACATGCCAGATTCAGCTCAAGGGAAGTCTGAAAAAAGCACCCCATCAGAGGATGTTCATCATCAACTCGATGTTAAAACTGGCATGCAACTCAGAGAGGCACTTCAGATGCAATTAGATGTTCAGAGGCATCTGCATGAACAACTAGAGATTCAGAGAAAATTGCAGTTACGAATTGAAGAACAGGGGAAGCAGCTGAGGATGCTGTTTGACCAGCAGCAGAAGACAAGTAATAGCCCAttgaattttgagaatttggcaAGTACGCCCGATGATGATAAATCAACTAGCCATAAAGATATTGAGGTTTCGATTTCTGAAGGGTCGGGAAattctttcttcccttccaaGATAAGTTA 1304 0.411 MKENKIDWRGRIQQRHGLNGGCNSEFGNRSCHYYDIKQLWGMGICGQSQPQGIAMAGGTEEPSSYADPASAKSSAAIMSCFDSPASAFYVTERCMGLPRYDSPAGNPSLSSQFSKIKDLEFPLYQSPRENLFLDSENQADPNLELSNTLQAMVKSQLNGDRYCKSPEKSSKIPCGNFSSSKFLPTEQNKLFIDEALRRKLSLPFEGNQDHTVACDSYSLPVGQLSFSPQKEKLSPTVSSASLSNASGKPASNGSIVSSKTRIRWTQALHDKFVECVNRLGGAEKATPKAILKLMDSDGLTIFHIKSHLQKYRIAKYMPDSAQGKSEKSTPSEDVHHQLDVKTGMQLREALQMQLDVQRHLHEQLEIQRKLQLRIEEQGKQLRMLFDQQQKTSNSPLNFENLASTPDDDKSTSHKDIEVSISEGSGNSFFPSKIS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02240 434 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 69 434 IPR044848 GO:0003700
Bva04g02240 434 Pfam Myb-like DNA-binding domain 263 312 IPR001005 -
Bva04g02240 434 Coils Coil 347 367 - -
Bva04g02240 434 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 259 314 IPR006447 GO:0003677
Bva04g02240 434 MobiDBLite consensus disorder prediction 388 405 - -
Bva04g02240 434 SUPERFAMILY Homeodomain-like 257 313 IPR009057 -
Bva04g02240 434 Gene3D - 258 317 - -
Bva04g02240 434 MobiDBLite consensus disorder prediction 388 434 - -
Bva04g02240 434 MobiDBLite consensus disorder prediction 417 434 - -
Bva04g02240 434 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 258 316 IPR017930 -
Bva04g02240 434 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 69 434 - -
Bva04g02240 434 Pfam MYB-CC type transfactor, LHEQLE motif 344 391 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02240 Bva-Chr4 21323935 21326463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02240 244 410 G2-like Transcription Factor Family AT3G04450 49.123 3.60e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva04g02240 Myb_CC_LHEQLE 1.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02240 - - ccaj:109797364 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02240 04 21323935 21326463 Bva04g02240 04 21323935 21326463 ECH