Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02235 ATGGATTGTCAACGCCATTATCTGCATCTTACCATCATATTCTTCCTGGCAATTTTGATTTCTAGGGCTTCAGCGCTTACTGATCCCCTTGAtgTCACAGCGCTCCAGGGTCTATACAGGACCCTGAACAACCCACCAGTACTCAAAGGATGGAATGGTGCCGACCCTTGTGATGAGTCTTGGACAGGAGTAGAATGTTCTGGGTCATCGGTTATACACCTTAAAATTCCAGGATTAAATCTCACAGGTTATCTAGGAGGTCAGCTGTATAATCTACGGAATTTGAAGAAACTTGATGTCAGCTCTAATAGCATAGGGAGTGAAATACCATTTGGCTTACCTCCCAACGCCACATATATAAACATGGCTTCCAACTTTTTGAGCAAAAATATCCCCCACTCATTAACTACCTTGAAAAAGCTCCGACATCTGAACTTGAGTCACAACTTCTTATCTGGACCTGTTGGCAATGTATTTACTGGCTTAGATAATCTCAGAGAGATGGATCtttcaaacaataatttcaCAGGAGATCTACCAAGTTCATTTGGTTACTTGTCAAACCTTAGTAAATTGTTCCTCCAGAATAACAGATTCTCTGGATCAGTCAGCTATCTGGCTGAACTTCCACTTACAGACTTGAACATTCAAGACAATCATTTTAGTGGCATTATTCCACAGCATTTTCAGTCCATACCAAATTTATGGATTGGAGGGAATAAATTCCATGCAGAGAACAACTCTCCTCCCTGGGCTTTTCCCTTGGACAGCGTACCACTTGAGCAAAATATTAGTCGTCCACCCACAACTCAAGCAAATGCCATTGAGAATCCCTCTCCCAAAGTAACAGTGCACAAGAAGAAGCATATGGGTCCTGGAGGAATTGCTTTTATGGTTGGAGGAGGAACACTATTGGCAACTTGTGTTGCACTCTTGATTGCAGTCCATTTGAATCGATTGAGAGCACACAGGCTGGAGAACTTGGAAAGCAGCAATAGCTCATTGCAATCTCCTCGAAGCAGTGCAACCATAGAAGTCTCTTCTACTGCACTAGGAGCGAGCCCACAAATCCCGCCATTTAATTCAGCATCCCTTCTGGGTACATTGCAATTGCCTCCTGTGCACCATAACAAGACAGAGGAAACGCCAAAAAGAAGTTTTTCCAGAAGACGCAGATTCCCCGCGAGGACCAAAGTTTACACTGTGGCGGAGCTTCAGTTAGCAACAAACAGCTTCAGGGAAGAAAACATTCTTGGAGAAGGATCTCTCGGTCGTGTCTATAAAGCTGAGTTTCCAGATGGCCAAATTTTTGCCGTGCAGAATATCAAAATGGCAGGCCTGTCTATCAATGAAGAGGAAAAGTTTTTGGATGCTGTTTGTACCGCTTCCCGTCTGAGGCACCCCAACCTCGTAGCACTTAATGGTTATTGTTTGGAGCACGGCCAGCATCTTCTTGTTTACGATTATGTTAGGAATCTAACACTGGACGATGCTCTTCACAGTGAAGTATACAAGCCTTTTTCATGGGCCCTCCGACTCCGGATTGCCCTAGGTGTTGCTCAGACTTTGGACTATCTGCATTCTACTTTCACCCCTCCTGTTGCCCATGGCAACTTGAAGGCTGCCAATATTCTACTTGATGACAATCTGATGCCTCGCGTCTGTGACTGTGGCCTAGCTATTTTGAGACCGCTGACAAGTAACAACATCAGAACTAAGGCTTCTGAAATTGCAATTGGAGATACTGGCTACACTGCACCTGAACACGGCCAAGCAGGAACTGGGATCGGGAACACGAAGGGTGACATCTTCGCCTTTGGGGTGTTGCTTCTGGAACTATTGACAGGGAGGAAACCTTTTGATGATTCCAGGCCAAGGGAGGAACAACATCTGGTGAAATGGGCTTCGCCCAGGCTTCATGATAATGAGAGTTTGGAACGGATGGTGGATCCGGGAATTAAAAGGACATTTTCATCCAAGGTTCTCTCCCGTTATGCAGATATTGTCTCCCTCTGCATACAGCCTGTGAAGGAATTCCGACCACCAATGTCTGAGGTCGTGGAGTCTCTTACAGTTACAACATTTTCACAAAAggtcaaaatggaaaaaataggGGTACCAGATGATCTAGCACTTGATCCACTCGAGAGGTCGTTCCGTTCAACCAACACTCGCTTTATAGGTTCACCGGCATTGAGCTATGTTTCTGCCTA 2213 0.4442 MDCQRHYLHLTIIFFLAILISRASALTDPLDVTALQGLYRTLNNPPVLKGWNGADPCDESWTGVECSGSSVIHLKIPGLNLTGYLGGQLYNLRNLKKLDVSSNSIGSEIPFGLPPNATYINMASNFLSKNIPHSLTTLKKLRHLNLSHNFLSGPVGNVFTGLDNLREMDLSNNNFTGDLPSSFGYLSNLSKLFLQNNRFSGSVSYLAELPLTDLNIQDNHFSGIIPQHFQSIPNLWIGGNKFHAENNSPPWAFPLDSVPLEQNISRPPTTQANAIENPSPKVTVHKKKHMGPGGIAFMVGGGTLLATCVALLIAVHLNRLRAHRLENLESSNSSLQSPRSSATIEVSSTALGASPQIPPFNSASLLGTLQLPPVHHNKTEETPKRSFSRRRRFPARTKVYTVAELQLATNSFREENILGEGSLGRVYKAEFPDGQIFAVQNIKMAGLSINEEEKFLDAVCTASRLRHPNLVALNGYCLEHGQHLLVYDYVRNLTLDDALHSEVYKPFSWALRLRIALGVAQTLDYLHSTFTPPVAHGNLKAANILLDDNLMPRVCDCGLAILRPLTSNNIRTKASEIAIGDTGYTAPEHGQAGTGIGNTKGDIFAFGVLLLELLTGRKPFDDSRPREEQHLVKWASPRLHDNESLERMVDPGIKRTFSSKVLSRYADIVSLCIQPVKEFRPPMSEVVESLTVTTFSQKVKMEKIGVPDDLALDPLERSFRSTNTRFIGSPALSYVSA 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02235 737 Pfam Leucine Rich Repeat 140 154 IPR001611 GO:0005515
Bva04g02235 737 Pfam Leucine Rich Repeat 94 116 IPR001611 GO:0005515
Bva04g02235 737 Gene3D Phosphorylase Kinase; domain 1 374 489 - -
Bva04g02235 737 SUPERFAMILY L domain-like 31 236 - -
Bva04g02235 737 SUPERFAMILY Protein kinase-like (PK-like) 388 692 IPR011009 -
Bva04g02235 737 ProSiteProfiles Protein kinase domain profile. 412 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02235 737 SMART LRR_typ_2 162 185 IPR003591 -
Bva04g02235 737 SMART LRR_typ_2 186 209 IPR003591 -
Bva04g02235 737 SMART LRR_typ_2 138 161 IPR003591 -
Bva04g02235 737 SMART LRR_typ_2 92 116 IPR003591 -
Bva04g02235 737 Pfam Protein tyrosine and serine/threonine kinase 415 690 IPR001245 GO:0004672|GO:0006468
Bva04g02235 737 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 2 ISOFORM X1 3 700 - -
Bva04g02235 737 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Bva04g02235 737 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 700 - -
Bva04g02235 737 Pfam Leucine rich repeat 158 199 IPR001611 GO:0005515
Bva04g02235 737 Gene3D Transferase(Phosphotransferase) domain 1 491 707 - -
Bva04g02235 737 Gene3D Ribonuclease Inhibitor 28 264 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02235 Bva-Chr4 21298859 21304852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02235 1 737 Strubbelig Receptor Gene Family AT5G06820 56.393 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Bva04g02235 PK_Tyr_Ser-Thr 6.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02235 - - cam:101498175 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02235 04 21298859 21304852 Bva13g02338 13 17809233 17818623 BWGD
Bva04g02235 04 21298859 21304852 Bva04g02235 04 21298859 21304852 ECH