Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02228 ATGCAGAGGCCTCCGCCGGAAGATTTTCTCTTGAAGGAGACCAAACCCCACCTTGGAGGGGGGAAGGTCTCTGGTGACAAACTAACGAGCACCTATGACCTCGTTGAGCAAATGCAATACCTCTATGTAAGGGTTGTTAAGGCTAAAGACTTGCCTGGAAAGGATGTCACTGGAAGTCTTGACCCTTATGTTGAGGTCAAGCTTGGAAACTACAAAGGCACAACCCGGCACTTTGAGAAGAAGAGTAATCCTGAATGGAACCAGGTATTTGCATTCTCAAAGGATCGGATTCAAGCTTCAGTGCTAGAGGTTACCGTGAAGGATAAGGATGTTGTGAAGGATGACTTCGTTGGTCGTGTGTTGTTTGATCTGAATGAGGTCCCTAAGCGGGTTCCACCTGATAGCCCTTTGGCACCCCAGTGGTATAGACTGGAGGATAGAAAGGGTGATAAGGCAAAGGGAGAACTCATGCTGGCTGTTTGGATGGGTACACAAGCTGATGAAGCATTCCCTGAAGCCTGGCACTCAGATGCAGCGACAGTTAGCGGAGCTGATGCTCTTGCCAACATAAGATCAAAAGTGTATCTATCTCCTAAGCTTTGGTATTTGAGGGTTAATGTAATAGAGGCACAAGACCTGCAACCGACTGATAAGGGTAGATACCCAGAAGTTTTTGTTAAGGCTATACTGGGAAATCAGGCTTTGAGGACTAGAATCTCTCAGAGCAGGAGTATCAATCCAATGTGGAATGAGGATTTGATGTTTGTAGCAGCAGAACCATTTGAAGAGCCCCTGATTTTGAGTGTGGAGGATAGAGTTGCATCTAACAAAGATGAAGTACTGGGGAGGTGTGCAATTCCTTTACAGTATGTGGACAGGAGATTAGATCACAAAGCTGTGAACACCAGGTGGTTCAATCTTGAGAGGCATATTGTTATAGAAggggaaaagaagaaggaccccAAGTTTGCAAGCAGGATCCATATGAGGATATGTCTTGAAGGTGGTTATCACGTTTTGGATGAATCTACTCACTACAGCAGTGATCTTCGACCAACAGCAAAACAGCTATGGAAGTCCAGTATTGGAGTTCTAGAATTGGGGATACTGAATGCGCAAGGGTTGATCCCAATGAAAACAAAGGATGGGCGAGGAACAACAGATGCTTACTGTGTAGCAAAATATGGACAGAAGTGGGTACGGACAAGGACAATTATTGATAGCTTTACACCCAAGTGGAATGAGCAATATACTTGGGAGGTTTTTGATCCTTGCACTGTCTTAACAATTGGTGTATTCGATAACTGCCATTTGCATGGTGGCGATAAGGCTGGAGGAGCAAGAGATTTAAAGATTGGAAAGGTACGGATTCGTCTTTCTACCCTGGCGACTGATCGGGTATATACGCATTCTTATCCACTTCTCGTTCTTCACCCCAATGGGGTGAAGAAAATGGGTGAAATCCACTTGGCTGTGAGGTTCACTTGTTCTTCTTTGCTTAATATGATGCTCGTGTACTCGCAGCCCTTGTTGCCAAAGATGCATTATATTCATCCGTTGACTGTTAGCCAACTTGACAGTTTGAGGCATCAAGCTACTCAGATTGTTTCAATGAGGCTTAGTCGTGCTGAACCACCATTGAGAAAGGAGGTGGTGGAATACATGCTAGATGTGGGTTCCCACATGTGGAGCATGAGAAGAAGCAAAGCCAACTTCTTCAGGATTATGGGAGTTTTGGGTGGATTGATTGCTGTTGGGAAATGGTTTGATCAGATTTGCAATTGGAAAAATCCCATCACTACAGTTTTGATTCACATCTTATTCATAATATTAGTCATGTACCCAGAGCTTATCCTACCTACAATTTTCCTTTACCTTTTCTTGATTGGAGTTTGGTACTATAGATGGAGGCCAAGGCATCCTCCTCATATGGACACTCGTCTCTCTCATGCGGATTCTGCACATCCTGATGAATTGGATGAAGAATTTGACACATTCCCTACCTCACGACCATCTGACATTGTGAGGATGAGGTATGATCGGCTCAGAAGTATTGCTGGGAGGATACAGACTGTGGTTGGTGACTTTGCTACTCAAGGGGAGAGGCTGCAATCTCTGCTCAGCTGGCGAGACCCTAGAGCTACTGGCCtctttgtaattttctgtCTGGTTGCTGCCATTGTGCTGTATGTCACTCCATTCCAAGTTGTGGCTCTCCTCACTGGATTTTATGTGCTCAGACATCCAAGGTTCCGTCATAAACTTCCTTCAGTGCCGCTGAATTTCTTCAGGAGGCTGCCTGCGAGAACAGACTGCATGCTGTG 2324 0.4449 MQRPPPEDFLLKETKPHLGGGKVSGDKLTSTYDLVEQMQYLYVRVVKAKDLPGKDVTGSLDPYVEVKLGNYKGTTRHFEKKSNPEWNQVFAFSKDRIQASVLEVTVKDKDVVKDDFVGRVLFDLNEVPKRVPPDSPLAPQWYRLEDRKGDKAKGELMLAVWMGTQADEAFPEAWHSDAATVSGADALANIRSKVYLSPKLWYLRVNVIEAQDLQPTDKGRYPEVFVKAILGNQALRTRISQSRSINPMWNEDLMFVAAEPFEEPLILSVEDRVASNKDEVLGRCAIPLQYVDRRLDHKAVNTRWFNLERHIVIEGEKKKDPKFASRIHMRICLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLELGILNAQGLIPMKTKDGRGTTDAYCVAKYGQKWVRTRTIIDSFTPKWNEQYTWEVFDPCTVLTIGVFDNCHLHGGDKAGGARDLKIGKVRIRLSTLATDRVYTHSYPLLVLHPNGVKKMGEIHLAVRFTCSSLLNMMLVYSQPLLPKMHYIHPLTVSQLDSLRHQATQIVSMRLSRAEPPLRKEVVEYMLDVGSHMWSMRRSKANFFRIMGVLGGLIAVGKWFDQICNWKNPITTVLIHILFIILVMYPELILPTIFLYLFLIGVWYYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTSRPSDIVRMRYDRLRSIAGRIQTVVGDFATQGERLQSLLSWRDPRATGLFVIFCLVAAIVLYVTPFQVVALLTGFYVLRHPRFRHKLPSVPLNFFRRLPARTDCML 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02228 774 ProSiteProfiles C2 domain profile. 346 472 IPR000008 -
Bva04g02228 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 354 IPR035892 -
Bva04g02228 774 ProSiteProfiles C2 domain profile. 22 142 IPR000008 -
Bva04g02228 774 MobiDBLite consensus disorder prediction 1 15 - -
Bva04g02228 774 PANTHER PROTEIN QUIRKY-LIKE 1 774 - -
Bva04g02228 774 Gene3D C2 domain 340 495 IPR035892 -
Bva04g02228 774 Pfam Plant phosphoribosyltransferase C-terminal 619 774 IPR013583 -
Bva04g02228 774 MobiDBLite consensus disorder prediction 1 23 - -
Bva04g02228 774 CDD C2C_MCTP_PRT_plant 202 352 - -
Bva04g02228 774 Pfam C2 domain 364 474 IPR000008 -
Bva04g02228 774 Pfam C2 domain 201 307 IPR000008 -
Bva04g02228 774 Pfam C2 domain 40 142 IPR000008 -
Bva04g02228 774 SMART C2_3c 364 471 IPR000008 -
Bva04g02228 774 SMART C2_3c 40 136 IPR000008 -
Bva04g02228 774 SMART C2_3c 202 300 IPR000008 -
Bva04g02228 774 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 1 774 - -
Bva04g02228 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 40 177 IPR035892 -
Bva04g02228 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 500 IPR035892 -
Bva04g02228 774 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Bva04g02228 774 CDD C2B_MCTP_PRT_plant 40 164 - -
Bva04g02228 774 CDD C2D_MCTP_PRT_plant 364 491 - -
Bva04g02228 774 Gene3D C2 domain 188 333 IPR035892 -
Bva04g02228 774 Gene3D C2 domain 24 162 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02228 Bva-Chr4 21275109 21278990 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02228 1 774 Lipid Metabolism Gene Families AT3G57880 91.214 0.0 1494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02228 - - zju:107407989 1494.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02228 04 21275109 21278990 Bva13g02342 13 17839304 17842954 BWGD
Bva04g02228 04 21275109 21278990 Bva07g01313 07 13739930 13743286 ECH
Bva04g02228 04 21275109 21278990 Bva09g01259 09 6801293 6804528 ECH
Bva04g02228 04 21275109 21278990 Bva04g02228 04 21275109 21278990 ECH