Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02227 ATGGCTTCCACTATTAAGAGCTCCAACCAAACAACTCCTCAGCTGGAACCACCCCCACTAACATCCCAtcgtcatcatcatcaacaacAAATACAAGagcaccaaatctcttttggAATGATGCAGTCACCTTCACCATCCTCCATGCCCGGGAATTACCTAAGCAAGGATTCCGGGGCTTATGATTTGGGAGAACTGGAtcaagctctttttctttatcttgacGGACAAGCAGACCCTTCCAACATTCAAGACCAACGGCCAGAGAACTCATTATCAGGAATGAGGCCTCCAACACTAAACATTTTCCCATCTCAGCCTATGCACGTTGAGCCACCATTATCATCTTCCAAGGCTAGCATGAAATTAGTTTCACCTCAAAGCAGTGGTTCCAAGAGGCCACCAGAACCGTCCGTGGAGTTGGCCAACCCCCGAAATGAAGCCGGTTCGGCTCCTGAACCGGCCAAAGCTGTCAAGCAGCGAGAGAGCAATCGCAAGGGTCCGACGTCAAGTTCCGAACAGGAAGCACCAAAAACGCCTGACCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTCGGAAAAAGGCGTATGTTCAGCAGCTAGAGTCAAGTAGGATTAGGCTTAATCAGATGGAGCAAGAGCTACAGCGTGCTAGAGCTCAAGGTGTTTTTTTCGGCGGTGGTGCACTTTTGGGAGGAGAACAAGGCTTTCCTGTCGCTATGAGTAGCACTACCTCAGAGGCTGCTATGTTCGACGTAGAGTATGCTAGGTGGCTAGAGCAGCATCATCGTCTGGTTTGCGAGCTAAGAGCTGCAGTTCAAGAGCATCTACCTGAGAATGAGCTCAGGCTATTTGTTGACAATTGCTTGGCACATTATGACCAAGTTATGACCCTCAAGGGCATTTTCGCCAAATCGGACGTATTCCATCTTGTTTCTGGCATGTGGAAGACCCCGGCTGAGCGTTGCTTCATGTGGATCGGTGGATTCAGGCCATCTGAACTCATTAAGGTTATTATAAGTCAAATCGAGCCTCTGACGGAGCAACAAATACTGGGTATATGTGGGTTGCAACAATCTACGCAAGAGGCAGAAGATGCACTCTCTCAAGGGCTTGAAGCGCTGAATCAATCTGTGTCGGAAACTATAACATCTGACTCTTTGAGCTGTCCTCCTAATATGGCTAACTACATGGGACAAATGGCCATGGCCATCAACAAGCTCTCTACAATTGAAAGTTTCGTGCGACAGGCAGATAATCTTCGGCAGCAGACCATTCACCGTCTGCATCAAATCCTAACAACACGTCAAGCAGCAAGGTGTCTGCTAGCAATTGCTGAATATTTTCATCGTCTGAGAGCGCTGAGTTCTCTTTGGCTGGCACGCCCTCGTCAAGAATA 1424 0.4649 MASTIKSSNQTTPQLEPPPLTSHRHHHQQQIQEHQISFGMMQSPSPSSMPGNYLSKDSGAYDLGELDQALFLYLDGQADPSNIQDQRPENSLSGMRPPTLNIFPSQPMHVEPPLSSSKASMKLVSPQSSGSKRPPEPSVELANPRNEAGSAPEPAKAVKQRESNRKGPTSSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQMEQELQRARAQGVFFGGGALLGGEQGFPVAMSSTTSEAAMFDVEYARWLEQHHRLVCELRAAVQEHLPENELRLFVDNCLAHYDQVMTLKGIFAKSDVFHLVSGMWKTPAERCFMWIGGFRPSELIKVIISQIEPLTEQQILGICGLQQSTQEAEDALSQGLEALNQSVSETITSDSLSCPPNMANYMGQMAMAINKLSTIESFVRQADNLRQQTIHRLHQILTTRQAARCLLAIAEYFHRLRALSSLWLARPRQE 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02227 474 SUPERFAMILY Leucine zipper domain 183 225 IPR046347 GO:0003700|GO:0006355
Bva04g02227 474 MobiDBLite consensus disorder prediction 79 100 - -
Bva04g02227 474 ProSiteProfiles DOG1 domain profile. 256 470 IPR025422 GO:0006351|GO:0043565
Bva04g02227 474 MobiDBLite consensus disorder prediction 77 185 - -
Bva04g02227 474 MobiDBLite consensus disorder prediction 1 18 - -
Bva04g02227 474 Pfam Seed dormancy control 274 348 IPR025422 GO:0006351|GO:0043565
Bva04g02227 474 Coils Coil 202 229 - -
Bva04g02227 474 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
Bva04g02227 474 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 73 473 - -
Bva04g02227 474 SMART brlzneu 179 265 IPR004827 GO:0003700|GO:0006355
Bva04g02227 474 MobiDBLite consensus disorder prediction 32 54 - -
Bva04g02227 474 PANTHER TRANSCRIPTION FACTOR TGA9 73 473 - -
Bva04g02227 474 MobiDBLite consensus disorder prediction 1 59 - -
Bva04g02227 474 CDD bZIP_HBP1b-like 183 232 - -
Bva04g02227 474 Pfam bZIP transcription factor 183 212 IPR004827 GO:0003700|GO:0006355
Bva04g02227 474 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Bva04g02227 474 Gene3D - 182 230 - -
Bva04g02227 474 MobiDBLite consensus disorder prediction 110 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02227 Bva-Chr4 21259886 21265170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02227 51 474 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.820 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva04g02227 DOG1 9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02227 K14431 - gmx:100815176 738.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02227 04 21259886 21265170 Bva13g02345 13 17858387 17864925 BWGD
Bva04g02227 04 21259886 21265170 Bva04g02227 04 21259886 21265170 ECH