Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02221 atgcTTCTTCCTCTCCAACTTGCTTCATTTCTTATTTGCtgcttctttcttcctttcacttCCTCCCTCAACTCCGATGGCCTGTCTCTCCTCGCACTTAAAGCTGCCATAGATTCTGATCCGACTGGAGTTCTCAAGTCGTGGTCCGAATCCGATTCTAGCCCTTGCCGGTGGGCCGGTGTGGTCTGCGCCTACGACCGAGTCACTCAAGTATCCCTCCCAAACAAAGCTTTAACTGGCTACATTCCCTCTGAGCTGGGTTTGATCGACTCTCTTAAGCGACTCAGTCTCTCTCACAACAACTTCTCCAAAGCCATTCCTTCTCGTCTCTTTAATGCTACCAATCTAGTTGTTCTGGACCTCTCTCATAACTCCCTCTCTGGCCTAATCCCACCTGAAATCAAATCTCTCCAATCCCTCAGGCATTTAGATTTATCCTCAAATTTGCTCAATGGATCTCTTCCCGAGGCTCTCTCTGATCTTACGGGCCTCGTCGGAAACTTGAATTTGTCTAACAATCGATTTTCCGGCGGGGTCCCGGAGTCTTTAGGGAAACTCCCTGTAATAGTGAGTTTGGATCTCCAGAACAACAATCTCACCGGAAAAATCCCTCAGGTGGGTTCACTGCTAAACCAGGGCCCAACGGCTTTCTCGGGAAACCCAGGCCTCTGTGGGTTTCCTTTGCAGAATGCATGCCCCGAAGCTCAAAACCCTGAGGTTTTCAGAAGCAACCAAGACCCTCAAAACCCCAAAACCCTTAACACTGGCTTCCCAGAAGTTCAAGAATCGAAGGCGAAGGAGAGAGGTGGGTCTGTGACTTTCCCTATAATTACCGGCGTTTCGCTATTTGTTGGGGCCGTTTCGTTGTCTCTGTGGATTGTCCGGAGACGATTGACGTTTAGCGAGGGCAaattgggaaaagaaaaattagataatgAGGTAGCCGAGGAGGACGGAGAAGTGCAAAAGGGTAAATTTGTGGCGATCAATGAAGGGTTTAATTTGGAATTAGAGGATTTATTAAGGGCATCTGCCTATGTTGTGGGGAAGAGCAGGAGTGGGATCGTGTACAAGGTGGTCGCCGTTGGGAAAGGATCGGGGCGGGCGGCAACAGTCGTGGCCGTGAGGCGGTTGAGCGAGGGTGATGCCACGTGGCGGCTCAAGGAGTTTGAATATGAGGTGGAGGCCATTGGGAGGGTCCACCACCCCAACATTGTCCCTTTAAGAGCATATTACTACGCAAATGATGAGAAACTGCTTATCACTGATTTCATCCGCAATGGCAGCTTGCACAATGCACTGCACGGTGGACCTTCCAGTTGTTTGCAACCATTGTCGTGGGCTACGAGGTTAAAAATTGCTCAAGGAGCTGCCAGAGGTTTAATGTACATACACGAGTTGAGTGGTCGCAAATACATCCATGGCAAcctaaaatcaacaaaaatctTGCTTGACGATGATCTCCAACCTTTGATATCCGGTTTCGGGCTTAGCCGTCTCGGTTTGAGCAGCAGCACAAAAAAGCACGTAACCTCTGCAATGGGGTCAAAATTTGCAGCTTCTTCTAACTGTTACATGGCTCCAGAGGTGCGCACGGCTGGTGGCAAGTTCACTCAGAAATGCGATGTTTATTCTTTTGGGATAGTGCTGTTGGAACTACTGACGGCTCGATTGCCAGATTCGGGGCCCGAAAATGATGGGAAGGTGCTTGAGAGTTCTGTGAGAAAAGCGTTTAAGGAGGAGCAGCCCTTGTCTGAGATTATAGACTCAGCGCTGCTGCCCGAGGTTCATGCCAAGAAACAAGTTGTTGCAGCTTTTCATATTGCACTAAACTGCACAGAACTTGACCCAGAATTACGACCTAAGATGAGAACTGTGTCTGAGAGCCTCGACCGCATCAAAATACAATG 1910 0.4764 MLLPLQLASFLICCFFLPFTSSLNSDGLSLLALKAAIDSDPTGVLKSWSESDSSPCRWAGVVCAYDRVTQVSLPNKALTGYIPSELGLIDSLKRLSLSHNNFSKAIPSRLFNATNLVVLDLSHNSLSGLIPPEIKSLQSLRHLDLSSNLLNGSLPEALSDLTGLVGNLNLSNNRFSGGVPESLGKLPVIVSLDLQNNNLTGKIPQVGSLLNQGPTAFSGNPGLCGFPLQNACPEAQNPEVFRSNQDPQNPKTLNTGFPEVQESKAKERGGSVTFPIITGVSLFVGAVSLSLWIVRRRLTFSEGKLGKEKLDNEVAEEDGEVQKGKFVAINEGFNLELEDLLRASAYVVGKSRSGIVYKVVAVGKGSGRAATVVAVRRLSEGDATWRLKEFEYEVEAIGRVHHPNIVPLRAYYYANDEKLLITDFIRNGSLHNALHGGPSSCLQPLSWATRLKIAQGAARGLMYIHELSGRKYIHGNLKSTKILLDDDLQPLISGFGLSRLGLSSSTKKHVTSAMGSKFAASSNCYMAPEVRTAGGKFTQKCDVYSFGIVLLELLTARLPDSGPENDGKVLESSVRKAFKEEQPLSEIIDSALLPEVHAKKQVVAAFHIALNCTELDPELRPKMRTVSESLDRIKIQ 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02221 636 MobiDBLite consensus disorder prediction 242 266 - -
Bva04g02221 636 Gene3D Ribonuclease Inhibitor 167 234 IPR032675 -
Bva04g02221 636 Gene3D Phosphorylase Kinase; domain 1 315 424 - -
Bva04g02221 636 PRINTS Leucine-rich repeat signature 116 129 - -
Bva04g02221 636 PRINTS Leucine-rich repeat signature 137 150 - -
Bva04g02221 636 ProSiteProfiles Protein kinase domain profile. 342 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02221 636 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 636 - -
Bva04g02221 636 Gene3D Transferase(Phosphotransferase) domain 1 425 636 - -
Bva04g02221 636 Pfam Protein tyrosine and serine/threonine kinase 348 630 IPR001245 GO:0004672|GO:0006468
Bva04g02221 636 Pfam Leucine rich repeat 91 150 IPR001611 GO:0005515
Bva04g02221 636 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Bva04g02221 636 SUPERFAMILY Protein kinase-like (PK-like) 347 630 IPR011009 -
Bva04g02221 636 Gene3D Ribonuclease Inhibitor 22 166 IPR032675 -
Bva04g02221 636 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 636 - -
Bva04g02221 636 MobiDBLite consensus disorder prediction 242 259 - -
Bva04g02221 636 SUPERFAMILY L domain-like 25 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02221 Bva-Chr4 21224858 21228120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02221 23 634 Receptor kinase-like Gene Family AT3G57830 60.469 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva04g02221 PK_Tyr_Ser-Thr 2.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02221 - - gmx:100796011 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02221 04 21224858 21228120 Bva04g02221 04 21224858 21228120 ECH